PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2BG023880.16

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB_related

Protein Properties

Length: 692aa MW: 74886.9 Da PI: 4.5115

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2BG023880.16	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	41.3	3.6e-13	14	57	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 +g W+ eEd ll +a k+lG++ W+ Ia+ + gRt++ +k+r+ + TRIDC2BG023880.16 14 KGGWSREEDMLLCEAQKLLGNK-WTEIAKVVS-GRTDNAVKNRFST 57 688*****************.*****.********976 PP

Sequence ? help Back to Top
Protein Sequence Length: 692 aa Download sequence
ECRWYNYLNT ECKKGGWSRE EDMLLCEAQK LLGNKWTEIA KVVSGRTDNA VKNRFSTLCK 60 RRAKDDELLE ENGTVCSNAS AKRVLTQSGG VTCAAPGSSP PIKNMSSCKP DFKENLAPNM 120 RSFGQQKSIR QDSRQPLASI CPDNQSVNIV KTQSLVTKTS TKQLHGEEQS CVKHDGNFLK 180 RNDPKLATLL QQADLLSSLA TKVNTENTSQ SMDEAWQKLQ HHLVKKDDND MSESSMSGTA 240 SLLDDLDDLI VDPYENEEED EQKSREQNGA TSQVAPDQIM DNCPVDQIAE ESSLCGNTLS 300 STMEPCPVAE ILAHINLGEA AEDMGLHFME YSSPTHAAQA QQAKADAEIP ASVDLSESAE 360 GSWSQFMEYT SPAHTVLHAN SSPAHTVQAQ QAKADAEIPV SVDLSEAAEG SWSQFMEYTS 420 PAHTVLHAEG DAETPASVKL SEAAEGSLPQ CMEHMSPAHT LLRAKTDSEI PASANSNEAA 480 EGSWSQFMEY MSPAHIVLHA KADAETPASV NLGEAAEGSL PQCMEPMSPA HTLLRAKTDY 540 EIPASANLSE AAKDDSLQCT EYTSPARADL QANADAEISE DFSEVAQDSR LQCAKFTSPA 600 HTAIKGKAVA KKGTSENCSD VPEDSSTQPC MEFTSPAHTV PTFHPFTDNV PTPKITASER 660 NFLLSVLELA SPGSKPETSQ QPSCKRALLN SL

Sequence ? help Back to Top

Protein Sequence Length: 692 aa Download sequence

ECRWYNYLNT ECKKGGWSRE EDMLLCEAQK LLGNKWTEIA KVVSGRTDNA VKNRFSTLCK  60
RRAKDDELLE ENGTVCSNAS AKRVLTQSGG VTCAAPGSSP PIKNMSSCKP DFKENLAPNM  120
RSFGQQKSIR QDSRQPLASI CPDNQSVNIV KTQSLVTKTS TKQLHGEEQS CVKHDGNFLK  180
RNDPKLATLL QQADLLSSLA TKVNTENTSQ SMDEAWQKLQ HHLVKKDDND MSESSMSGTA  240
SLLDDLDDLI VDPYENEEED EQKSREQNGA TSQVAPDQIM DNCPVDQIAE ESSLCGNTLS  300
STMEPCPVAE ILAHINLGEA AEDMGLHFME YSSPTHAAQA QQAKADAEIP ASVDLSESAE  360
GSWSQFMEYT SPAHTVLHAN SSPAHTVQAQ QAKADAEIPV SVDLSEAAEG SWSQFMEYTS  420
PAHTVLHAEG DAETPASVKL SEAAEGSLPQ CMEHMSPAHT LLRAKTDSEI PASANSNEAA  480
EGSWSQFMEY MSPAHIVLHA KADAETPASV NLGEAAEGSL PQCMEPMSPA HTLLRAKTDY  540
EIPASANLSE AAKDDSLQCT EYTSPARADL QANADAEISE DFSEVAQDSR LQCAKFTSPA  600
HTAIKGKAVA KKGTSENCSD VPEDSSTQPC MEFTSPAHTV PTFHPFTDNV PTPKITASER  660
NFLLSVLELA SPGSKPETSQ QPSCKRALLN SL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G02820.1	9e-46	MYB family protein

Link Out ? help Back to Top
Ensembl	TRIDC2BG023880.16