PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2BG022240.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

HSF

Protein Properties

Length: 343aa MW: 37850.6 Da PI: 7.3618

Description

HSF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2BG022240.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HSF_DNA-bind	107.3	1.2e-33	62	154	2	103
HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXX CS HSF_DNA-bind 2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkell 94 Fl+k+y++++d+ +++++sw e+ +fvv+ + efa+++Lp+yFkh+nf+SFvRQLn+Y F+k+ ++ weF+++ F+kg k+ll TRIDC2BG022240.1 62 FLTKTYQLVDDPCTDHIVSWGEDDATFVVWRPPEFARDLLPNYFKHNNFSSFVRQLNTYVFRKIVADR---------WEFANEFFRKGAKHLL 145 9**************************************************************999.........************ PP XXXXXXXXX CS HSF_DNA-bind 95 ekikrkkse 103 +i+r+ks+ TRIDC2BG022240.1 146 AEIHRRKSS 154 ****997 PP

Sequence ? help Back to Top
Protein Sequence Length: 343 aa Download sequence
LSDRVPELLG RSSGVYVRVV EKAMAFLVER CGEMVVSMEM GSGAPGAHGG GGIAGKPVPA 60 PFLTKTYQLV DDPCTDHIVS WGEDDATFVV WRPPEFARDL LPNYFKHNNF SSFVRQLNTY 120 VFRKIVADRW EFANEFFRKG AKHLLAEIHR RKSSQPPPPS MVPHQAAYHH HYHLGNTFSP 180 PPPPPPAAHH HHHHPVYQHF HEEPAAAAAS HGGGNGGGDF LAALSEDNRQ LRRHNSLLLS 240 ELAHMKKLYN DIIYFLQNHV APVTSPSSAA SQRHLPLPGA GAGVAASNSC RLLELDMDVD 300 RNSPAAEEDD TVKLFGVALH HGKKKRAHRE ERGDVVHDLG SEV

Sequence ? help Back to Top

Protein Sequence Length: 343 aa Download sequence

LSDRVPELLG RSSGVYVRVV EKAMAFLVER CGEMVVSMEM GSGAPGAHGG GGIAGKPVPA  60
PFLTKTYQLV DDPCTDHIVS WGEDDATFVV WRPPEFARDL LPNYFKHNNF SSFVRQLNTY  120
VFRKIVADRW EFANEFFRKG AKHLLAEIHR RKSSQPPPPS MVPHQAAYHH HYHLGNTFSP  180
PPPPPPAAHH HHHHPVYQHF HEEPAAAAAS HGGGNGGGDF LAALSEDNRQ LRRHNSLLLS  240
ELAHMKKLYN DIIYFLQNHV APVTSPSSAA SQRHLPLPGA GAGVAASNSC RLLELDMDVD  300
RNSPAAEEDD TVKLFGVALH HGKKKRAHRE ERGDVVHDLG SEV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G46264.1	6e-76	HSF family protein

Link Out ? help Back to Top
Ensembl	TRIDC2BG022240.1