PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2BG021720.8

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

Protein Properties

Length: 536aa MW: 59993.4 Da PI: 6.0922

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2BG021720.8	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	48.8	1.2e-15	208	286	1	85
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE- CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld 85 f+k +++s+v + +l lp f+++h + +e++t +lede+g ++ k+ + +++ l++GW++F+ +++k+gD+vvF+l+ TRIDC2BG021720.8 208 FVKHMLHSHVVQGFWLGLPSVFCNKHL-P-KEDTTFVLEDEDGHNYDAKY--LGAKQG--LSGGWRGFAINHDIKVGDVVVFQLV 286 899******************9995.3.3667************..888877..9*******************964 PP

Sequence ? help Back to Top
Protein Sequence Length: 536 aa Download sequence
LLLAAAFQRK RGRPAGGGSP SVNKSQRDKM VMEQKMALVH QRLALLDSES DKDADVVPTA 60 TMQDDKLAAV VVDQQPVVIN FGDTDDEDEY VPLRIVRPRR VDSEQKKLLD VSQTHNSQDT 120 DTAKKKRGRL VKAQSNMEQK LNLSTPRLAL VESGCSNSSK SDIDDDLVPM VAAVNCKRTF 180 ASVQGNFGSA MERAEEVLVK LPAEHPSFVK HMLHSHVVQG FWLGLPSVFC NKHLPKEDTT 240 FVLEDEDGHN YDAKYLGAKQ GLSGGWRGFA INHDIKVGDV VVFQLVYILR ANNFTTTDGA 300 LGLLCLEAGK ENILKEESSN DVKSKENPKV QNDSSNPASE SMKEGIRFSD TAIDFDDVKN 360 FSNFNIIVDG LVIDCKFPDH LRKTYYELCC AQESFLHKDL LKQINLTLAV GVIMETINIA 420 EGIRACEARA SSHEDFVVWK KTLEAFELLG MNVKFLLKRI DGLLSLSARP RDPAEHEGYK 480 EMKLERARAG EKMKELESRM SSVKDTLKKM DVEMEEMECS AKRTEEMLRR LATAPW

Sequence ? help Back to Top

Protein Sequence Length: 536 aa Download sequence

LLLAAAFQRK RGRPAGGGSP SVNKSQRDKM VMEQKMALVH QRLALLDSES DKDADVVPTA  60
TMQDDKLAAV VVDQQPVVIN FGDTDDEDEY VPLRIVRPRR VDSEQKKLLD VSQTHNSQDT  120
DTAKKKRGRL VKAQSNMEQK LNLSTPRLAL VESGCSNSSK SDIDDDLVPM VAAVNCKRTF  180
ASVQGNFGSA MERAEEVLVK LPAEHPSFVK HMLHSHVVQG FWLGLPSVFC NKHLPKEDTT  240
FVLEDEDGHN YDAKYLGAKQ GLSGGWRGFA INHDIKVGDV VVFQLVYILR ANNFTTTDGA  300
LGLLCLEAGK ENILKEESSN DVKSKENPKV QNDSSNPASE SMKEGIRFSD TAIDFDDVKN  360
FSNFNIIVDG LVIDCKFPDH LRKTYYELCC AQESFLHKDL LKQINLTLAV GVIMETINIA  420
EGIRACEARA SSHEDFVVWK KTLEAFELLG MNVKFLLKRI DGLLSLSARP RDPAEHEGYK  480
EMKLERARAG EKMKELESRM SSVKDTLKKM DVEMEEMECS AKRTEEMLRR LATAPW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G19184.1	9e-33	B3 family protein

Link Out ? help Back to Top
Ensembl	TRIDC2BG021720.8