PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2BG021720.6

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

Protein Properties

Length: 353aa MW: 39950.8 Da PI: 5.9907

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2BG021720.6	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	55.9	7.6e-18	18	108	1	99
EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..E CS B3 1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelv 93 f+k +++s+v + +l lp f+++h + +e++t +lede+g ++ k+ + +++ l++GW++F+ +++k+gD+vvF+l+++ +f + TRIDC2BG021720.6 18 FVKHMLHSHVVQGFWLGLPSVFCNKHL-P-KEDTTFVLEDEDGHNYDAKY--LGAKQG--LSGGWRGFAINHDIKVGDVVVFQLVSSAKF--K 102 899******************9995.3.3667************..888877..9********************9876666..9 PP EEEE-S CS B3 94 vkvfrk 99 v ++r+ TRIDC2BG021720.6 103 VYILRA 108 999886 PP

Sequence ? help Back to Top
Protein Sequence Length: 353 aa Download sequence
MERAEEVLVK LPAEHPSFVK HMLHSHVVQG FWLGLPSVFC NKHLPKEDTT FVLEDEDGHN 60 YDAKYLGAKQ GLSGGWRGFA INHDIKVGDV VVFQLVSSAK FKVYILRANN FTTTDGALGL 120 LCLEAGKENI LKEESSNDVK SKENPKVQND SSNPASESMK EGIRFSDTAI DFDDVKNFSN 180 FNIIVDGLVI DCKFPDHLRK TYYELCCAQE SFLHKDLLKQ INLTLAVGVI METINIAEGI 240 RACEARASSH EDFVVWKKTL EAFELLGMNV KFLLKRIDGL LSLSARPRDP AEHEGYKEMK 300 LERARAGEKM KELESRMSSV KDTLKKMDVE MEEMECSAKR TEEMLRRLAT APW

Sequence ? help Back to Top

Protein Sequence Length: 353 aa Download sequence

MERAEEVLVK LPAEHPSFVK HMLHSHVVQG FWLGLPSVFC NKHLPKEDTT FVLEDEDGHN  60
YDAKYLGAKQ GLSGGWRGFA INHDIKVGDV VVFQLVSSAK FKVYILRANN FTTTDGALGL  120
LCLEAGKENI LKEESSNDVK SKENPKVQND SSNPASESMK EGIRFSDTAI DFDDVKNFSN  180
FNIIVDGLVI DCKFPDHLRK TYYELCCAQE SFLHKDLLKQ INLTLAVGVI METINIAEGI  240
RACEARASSH EDFVVWKKTL EAFELLGMNV KFLLKRIDGL LSLSARPRDP AEHEGYKEMK  300
LERARAGEKM KELESRMSSV KDTLKKMDVE MEEMECSAKR TEEMLRRLAT APW

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G19184.1	1e-37	B3 family protein

Link Out ? help Back to Top
Ensembl	TRIDC2BG021720.6