PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2BG021670.6
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family C3H
Protein Properties Length: 286aa    MW: 33729.9 Da    PI: 9.5284
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2BG021670.6genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH25.32.7e-083958626
                      -SGGGGTS--TTTTT-SS-SS CS
           zf-CCCH  6 CrffartGtCkyGdrCkFaHg 26
                      C  f++ G+C++Gd+C+F+H+
  TRIDC2BG021670.6 39 CYAFQK-GECSRGDTCRFSHD 58
                      999***.*************7 PP
2zf-CCCH24.83.7e-086688326
                      S---SGGGGTS--TTTTT-SS-SS CS
           zf-CCCH  3 telCrffartGtCkyGdrCkFaHg 26
                      +  C  f++ G+C++G++C+F+H+
  TRIDC2BG021670.6 66 RGVCYAFQK-GECSRGASCRFSHD 88
                      567******.*************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 286 aa     Download sequence    
MVIFQRNANT GWGSKEDDPK WEHDRHRGPQ NKGESCGVCY AFQKGECSRG DTCRFSHDEQ  60
VAVQGRGVCY AFQKGECSRG ASCRFSHDEQ RNANTDRGSR EDSNARRQHD HEPPKSHKNF  120
PDRTKEEARS GDRDGQSSRS ELYRDRDSRT IYGDRDTKDR NGNMHEKSPA RYRGDRQRGD  180
DRGREDRSSD TKDRDRNGHE KSPERSRGDR QRGDDRGRED KSDIKDRDRN GYEKSPERPR  240
GDRQRGDDRR REDRSESKRS RHDKDSGVRY ERRGDKEEEW YRKSQR