PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2BG018570.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

M-type_MADS

Protein Properties

Length: 187aa MW: 21168.4 Da PI: 9.6975

Description

M-type_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2BG018570.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	29.5	9.6e-10	24	62	3	41
--SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE- CS SRF-TF 3 ienksnrqvtfskRrngilKKAeELSvLCdaevaviifs 41 i ++s r t+ Rrn + KK EL +LC+++++v+++ TRIDC2BG018570.1 24 IREDSTRRRTYETRRNYLTKKVGELGILCNTKACVLVYD 62 667888889****************************95 PP

Sequence ? help Back to Top
Protein Sequence Length: 187 aa Download sequence
LPFSSASFTL RTAMVRKKVP LRYIREDSTR RRTYETRRNY LTKKVGELGI LCNTKACVLV 60 YDEGASEPYV YPSHAEAVEI LNRYKAMPNM PQFKKTMSQE EFLTKCLAKL QHQANKLHSE 120 REDRDIRALL HKAMLGGNLN AEEVASVGCT SGEIHKSLVE RIAKTNPQLP VFQPQVPYVT 180 GSVDLGP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28700.1	2e-17	M-type_MADS family protein

Link Out ? help Back to Top
Ensembl	TRIDC2BG018570.1