PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2BG018540.9

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

HB-other

Protein Properties

Length: 453aa MW: 51289.1 Da PI: 9.2258

Description

HB-other family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2BG018540.9	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	45.7	1.1e-14	35	86	6	57
S--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHHC CS Homeobox 6 tftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakekk 57 + ++ q++ Le+++ + +yp+ e+ +e A+++gLt +qV++WF+ rR kek+ TRIDC2BG018540.9 35 KKSPLQIQMLESFYSEVQYPKPEDVTEYAASVGLTYNQVRIWFKERRRKEKR 86 66899**********************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 453 aa Download sequence
RDFAASAPSA GSGNWAFSQM MAKGFLAKSD NAGTKKSPLQ IQMLESFYSE VQYPKPEDVT 60 EYAASVGLTY NQVRIWFKER RRKEKRHMEA AEVHMETQAS ARSNWPRCSS SRSSNSSQSP 120 TQDTTGHHSY QDQSVLKKRK IMSPTAQRST LPFENNDPVR KHGKGKGLMT VWHAMYSQTA 180 EIQDCSSFID ESGCLRSLRP FEDCGRKLAQ VQRQTSPQKK VNKKSRPPPS KRKVPCGRVT 240 DLTEHPPVEC HLSVDESESS ELRTEQATLV DDEELELSEL QAGPNPLRCS AHISSTGRHG 300 CPLCKDLLAR FPPPSVRMKQ LFPTKPWESS PEMVKKLFQV VRFVYTHFGS LDVHPFTFDE 360 FAQAFHDKDS SLLGKVHVSL LKLLMLNTER GSGSVFVPRS SKDSRFLSFL NFVREQEFDV 420 NFWIKSLNSL TWVEILRQVL VASGFGSDHH MLN

Sequence ? help Back to Top

Protein Sequence Length: 453 aa Download sequence

RDFAASAPSA GSGNWAFSQM MAKGFLAKSD NAGTKKSPLQ IQMLESFYSE VQYPKPEDVT  60
EYAASVGLTY NQVRIWFKER RRKEKRHMEA AEVHMETQAS ARSNWPRCSS SRSSNSSQSP  120
TQDTTGHHSY QDQSVLKKRK IMSPTAQRST LPFENNDPVR KHGKGKGLMT VWHAMYSQTA  180
EIQDCSSFID ESGCLRSLRP FEDCGRKLAQ VQRQTSPQKK VNKKSRPPPS KRKVPCGRVT  240
DLTEHPPVEC HLSVDESESS ELRTEQATLV DDEELELSEL QAGPNPLRCS AHISSTGRHG  300
CPLCKDLLAR FPPPSVRMKQ LFPTKPWESS PEMVKKLFQV VRFVYTHFGS LDVHPFTFDE  360
FAQAFHDKDS SLLGKVHVSL LKLLMLNTER GSGSVFVPRS SKDSRFLSFL NFVREQEFDV  420
NFWIKSLNSL TWVEILRQVL VASGFGSDHH MLN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	80	85	RRRKEK
2	137	166	KKRKIMSPTAQRSTLPFENNDPVRKHGKGK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G12750.1	1e-54	HB-other family protein

Link Out ? help Back to Top
Ensembl	TRIDC2BG018540.9