PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2BG016990.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 304aa    MW: 32052 Da    PI: 7.2058
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2BG016990.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.57e-1856104355
               AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                       + GVr+++ +gr++AeIrdp++   + r++lg+f+ta+eAa a+++a+++++g
  TRIDC2BG016990.1  56 FLGVRRRP-WGRYAAEIRDPTT---KERHWLGTFDTAQEAALAYDRAALSMKG 104
                       56******.**********965...5************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 304 aa     Download sequence    
RSSSGGGQAS QMMAFSEHSL PKPIAGHPQP QPSPPSSPSE RPAPRGRRRA QEPGRFLGVR  60
RRPWGRYAAE IRDPTTKERH WLGTFDTAQE AALAYDRAAL SMKGAQARTN FVYAHAAYNN  120
YPPFLAPFHA QQQPAAYASS TMPYGGQQRA GAAAPHIGSS YHGHGYHQQG PGAGAGECSM  180
PVLNAADHGA SSPMDVRGSG GHDFLFPSAD DNSGYLSSVV PESCLRPRGG DLQDARRYSV  240
SDADAYGLGL REDVDDLASM VAGFWGGADA AYGGFAPANG GGHDMVASSQ GSDNGYSPFS  300
FLSH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G18560.19e-34ERF family protein