PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2BG016730.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family FAR1
Protein Properties Length: 670aa    MW: 78609.9 Da    PI: 7.2061
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2BG016730.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR180.72.5e-2528122191
              FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk...tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHel 89 
                       kfYn+YA e GFsvrk + +  + n++i+ +++vCs+eg ree++ k   ++++r++r+ tr+gCkak+++ +   +g+w v+++  eHnH+l
  TRIDC2BG016730.1  28 KFYNKYALEKGFSVRKGYVEWDEANEKIILKKLVCSREGCREEKHMKrkrEDRKRKPRNITRVGCKAKFVIARVAkTGRWFVKDFIDEHNHPL 120
                       6*****************************************99988777889999***************99988****************9 PP

              FAR1  90 ap 91 
                       ap
  TRIDC2BG016730.1 121 AP 122
                       86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 670 aa     Download sequence    
MADVSAECMA EYDDVVSRMF DSEEEGFKFY NKYALEKGFS VRKGYVEWDE ANEKIILKKL  60
VCSREGCREE KHMKRKREDR KRKPRNITRV GCKAKFVIAR VAKTGRWFVK DFIDEHNHPL  120
APRDLACFLR SHRRISDEQK ADIIEMESVG IRKHKIMDVL CMQYGGYDHV GCMTRDIYNF  180
CHRYKQETVA AGDAQTVIRH MMARQERDPD YFFKYLVDKD GHLKGLFWSD TQSRLDYEAF  240
GDVVVFDSTY RTNKYNLPFV PFVGLNHHRN TVIFGCEIIS HETNEAYEWM LRTFSEAMSQ  300
KHSISVITDG DLAMQRAVRV VWPDSYHRLC VWHIQQNIVR HLHDDEVREE FRSFIYDSSS  360
TVEHERKWIE FLRRNEVTSE ESWLHQMYQM RKLWCAPYLV GRCFLGLSSN QRSESLNSVL  420
HTHLEGKMTL FDMLEHYERC LSGRRLNEAI LDIVALQSVP FTDADASSLE KHAARVFTPC  480
MFQLVRWSIN AVSKCVISEI LDAWELTTYV VAKIDRREKK FEVRCEMNEG SLYMISCSCR  540
KLECLGTPCS HIFYILGIRQ VELLPRCCVP MRWTMSAKSA FPPIRKSEMY DYSASLVRYR  600
ELRNLSHAAC FRACQSSEEY QRLEMVLSEQ DGNKESSRGQ EECIRFGPVL PQTTEIDCGD  660
LEKVLDPVHV
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
17683KREDRKRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.17e-93FAR1 family protein