PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC2BG015390.3 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | FAR1 | ||||||||
Protein Properties | Length: 239aa MW: 26864.2 Da PI: 4.8972 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 36.6 | 1.5e-11 | 152 | 231 | 1 | 90 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fYn Y+ e+ F +r ks+ + + + ++ vC ++gk++ e+++ + ++C a +++ + +d+ w++t+ + HnH+++ TRIDC2BG015390.3 152 DFYNLYSWEICFGIRYGKSRLNAERT-KSIQEIVCGCSGKPDAENSR---------SCMCECPALIRLLRASDNSWYITEHRASHNHSMS 231 6*****************99995544.67789********9997665.........899****************************985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 239 aa Download sequence |
MDIEGMEFLL DAVDRFPVWE EFADNLDHID PVPLMYLLDN GAANQDIRQG DVDSGITEMV 60 CDGVLTDAQV GGQRRRDESP TRSAQSTGRV NPQAPGWTKR LRLGSVPPDR VPCPSRMSAL 120 ELSMRKYAEQ PDKNVVRPEL GLSFDSLGEA YDFYNLYSWE ICFGIRYGKS RLNAERTKSI 180 QEIVCGCSGK PDAENSRSCM CECPALIRLL RASDNSWYIT EHRASHNHSM SLTMGEKVH |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G06250.1 | 8e-10 | FAR1 family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC2BG015390.3 |