PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2BG014810.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

NAC

Protein Properties

Length: 350aa MW: 38333.1 Da PI: 7.7373

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2BG014810.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	165.7	1.6e-51	14	141	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevl 93 lppGfrFhPtdeel+ +yL++++++ ++++ +i++vdiyk++PwdLp+++ ++ ewyfFs+rd+ky++g r+nra+ sgyWkatg+dk+++ TRIDC2BG014810.2 14 LPPGFRFHPTDEELILHYLRNRAAAAPCPV-PIIADVDIYKFDPWDLPSQAVYGDCEWYFFSPRDRKYPNGIRPNRAAGSGYWKATGTDKPIH 105 79**************************.88***********76667789********************************* PP NAM 94 sk.kgelvglkktLvfykgrapkgektdWvmheyrl 128 ++ +g+ vg+kk Lvfy+gr pkg+kt W+mheyrl TRIDC2BG014810.2 106 DAaTGQGVGVKKALVFYTGRPPKGTKTAWIMHEYRL 141 9978888*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 350 aa Download sequence
MSMAQQGQGA ATSLPPGFRF HPTDEELILH YLRNRAAAAP CPVPIIADVD IYKFDPWDLP 60 SQAVYGDCEW YFFSPRDRKY PNGIRPNRAA GSGYWKATGT DKPIHDAATG QGVGVKKALV 120 FYTGRPPKGT KTAWIMHEYR LAADPLAAAV NTYKPIKFRN VSMRLDDWVL CRIYKKTGLA 180 SPMVPPLADY DHMADHDDLS SGGTFTDATC RPMIRQQHHQ QPHAGRLPTF PSFSELFDDY 240 AFGQNLDTYV EHGATHHLAV HPSLNQLLPV GDSRHVVEPS YYAPSSSSPD ASGGSAGKRK 300 AASPEEPGTH QPSAKKLNGS CFDAPPQSAN GWQAVASVLG GLNHHMLPQF

Sequence ? help Back to Top

Protein Sequence Length: 350 aa Download sequence

MSMAQQGQGA ATSLPPGFRF HPTDEELILH YLRNRAAAAP CPVPIIADVD IYKFDPWDLP  60
SQAVYGDCEW YFFSPRDRKY PNGIRPNRAA GSGYWKATGT DKPIHDAATG QGVGVKKALV  120
FYTGRPPKGT KTAWIMHEYR LAADPLAAAV NTYKPIKFRN VSMRLDDWVL CRIYKKTGLA  180
SPMVPPLADY DHMADHDDLS SGGTFTDATC RPMIRQQHHQ QPHAGRLPTF PSFSELFDDY  240
AFGQNLDTYV EHGATHHLAV HPSLNQLLPV GDSRHVVEPS YYAPSSSSPD ASGGSAGKRK  300
AASPEEPGTH QPSAKKLNGS CFDAPPQSAN GWQAVASVLG GLNHHMLPQF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G69490.1	8e-74	NAC family protein

Link Out ? help Back to Top
Ensembl	TRIDC2BG014810.2