PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | TRIDC2BG013930.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
|
||||||||
Family | FAR1 | ||||||||
Protein Properties | Length: 186aa MW: 19706.4 Da PI: 4.9774 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 31.7 | 4.9e-10 | 134 | 174 | 3 | 43 |
FAR1 3 YneYAkevGFsvrkskskkskrngeitkrtfvCskegkree 43 Yn+YA ++GFs++ s+s++s ++ k+tf+C+k+gk++ TRIDC2BG013930.2 134 YNAYALKIGFSMKASTSRRSACTNVLEKQTFCCNKSGKPKI 174 9*************************************985 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 186 aa Download sequence |
MAELDLNEFP DDFDDCDGGP LYCTQVPDGK MPISIEGVGE SPDLRSAPVQ DVLSVEFRVA 60 AAAAISASDA TATETVAPAP AVFSRALTLP SHGGQVHTGG AGLFGFVVNE VRSSPQEPYV 120 GMEFDTLAGA KTRYNAYALK IGFSMKASTS RRSACTNVLE KQTFCCNKSG KPKIKMMMST 180 PLCLKN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G18960.1 | 2e-09 | FAR1 family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | TRIDC2BG013930.2 |