PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC2BG013750.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | GRAS | ||||||||
Protein Properties | Length: 715aa MW: 77106.9 Da PI: 6.584 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 422.1 | 4.7e-129 | 349 | 714 | 1 | 374 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlar.svselykalppsetseknsseelaalklfsevsPilk 92 lv+lLl+cA++vs+gd+ a + L l+ asp gd+mqR+a+yf+ ALa+rl+ s++ ++ + + + s ++l++++++++++P++k TRIDC2BG013750.1 349 LVHLLLACADFVSKGDQPSALRHLHLLRRVASPLGDSMQRVASYFADALATRLSVsSGTAISPRGAGAPYPFPPSPDTLKIYQILYQACPYIK 441 68***************************************************9845555555444444444459****************** PP GRAS 93 fshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakr 185 f+h+taNqaI ea++ge+rvH++D+di qG QWpa+lqaLa+Rp+gpp+lR+Tgvg+ +++++etg+ La++A++l+vpfef++ va++ TRIDC2BG013750.1 442 FAHFTANQAIFEAFHGEDRVHVVDLDILQGYQWPAFLQALAARPGGPPTLRLTGVGH----PATAVRETGRHLASLAASLRVPFEFHAAVADK 530 *********************************************************....88****************************** PP GRAS 186 ledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpre 278 le l++ +L+ + gEalaVn v ++hr++ ++l +L+++++ Pk++++veqea hn++ Fl rfleal+yysa+fdsl+a++p++ TRIDC2BG013750.1 531 LERLRPAALQRRVGEALAVNAVNRMHRVP--GAHLG----PLLSMIRDQAPKIMTLVEQEAGHNGPYFLGRFLEALHYYSAIFDSLDATFPAD 617 ****************************9..44444....5**************************************************** PP GRAS 279 seerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsv 370 s r+kvE+ ll++ei+nvvacegaer++rhe+l +Wr+ +e+ GF++vpls a+ q + ll ++ +dgyr++ee+g+l+lgW+dr+++ + TRIDC2BG013750.1 618 SAPRMKVEQCLLAPEIRNVVACEGAERVARHERLDRWRRIMEDRGFEAVPLSPAAVGQSQVLLGLYGaGDGYRLNEEKGCLLLGWQDRAIIGA 710 ********************************************************************************************* PP GRAS 371 SaWr 374 SaWr TRIDC2BG013750.1 711 SAWR 714 ***8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 715 aa Download sequence |
MGTLNCAVDM SSGTKQLQHQ PAAPTSPTAS FSESNIVASS ADPDAIDALA GLQALRFDGD 60 IDGEIQSPDL AMWESLFADQ IGAGAASGAD FLMSSPRRDF SPLRDFMASS PKRDYMVSSP 120 KRDYMMSSPK RDYMVSSPKR EMVASPRRTF SNLYNNSTSN QSYMHGTLHG MDTGSPSNLA 180 GYGKGKSSQS PLHKGFVNNA HSNSSKSNLS CSSSYVNSSE NLALPSLNSS FLEDGYLAYQ 240 LPPEKDAGGS SSAGTSATQL PTLSECLAMP EPVYGARDEA AVGRGIPVGG LQPDHLYYAS 300 QFGAADGLPL QHQMAKPDQW ADSSSLHSML GSVIQSDQAE QEQDSGLQLV HLLLACADFV 360 SKGDQPSALR HLHLLRRVAS PLGDSMQRVA SYFADALATR LSVSSGTAIS PRGAGAPYPF 420 PPSPDTLKIY QILYQACPYI KFAHFTANQA IFEAFHGEDR VHVVDLDILQ GYQWPAFLQA 480 LAARPGGPPT LRLTGVGHPA TAVRETGRHL ASLAASLRVP FEFHAAVADK LERLRPAALQ 540 RRVGEALAVN AVNRMHRVPG AHLGPLLSMI RDQAPKIMTL VEQEAGHNGP YFLGRFLEAL 600 HYYSAIFDSL DATFPADSAP RMKVEQCLLA PEIRNVVACE GAERVARHER LDRWRRIMED 660 RGFEAVPLSP AAVGQSQVLL GLYGAGDGYR LNEEKGCLLL GWQDRAIIGA SAWRC |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G66350.1 | 1e-102 | GRAS family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC2BG013750.1 |