PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2BG012110.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family HSF
Protein Properties Length: 317aa    MW: 35466.9 Da    PI: 6.6854
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2BG012110.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind113.11.8e-35521422101
                       HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXX CS
      HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkell 94 
                       Fl+k+y++++d+++++++sws+ +nsfvv+d++ fa+ +Lp++Fkhsnf+SFvRQLn+YgF+kv+ ++         weF+++ F +g+++ll
  TRIDC2BG012110.2  52 FLTKTYDMVDDPNTDSIMSWSSGNNSFVVWDPHAFATVLLPRHFKHSNFSSFVRQLNTYGFRKVDPDR---------WEFANEGFLRGQRHLL 135
                       9****************************************************************999.........**************** PP

                       XXXXXXX CS
      HSF_DNA-bind  95 ekikrkk 101
                       ++i+r+k
  TRIDC2BG012110.2 136 KNIRRRK 142
                       *****98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 317 aa     Download sequence    
RVLGGLGGMD PVPSLVKEEE EEEGAHGRGD SPGARAAPRP MEGLHDAGPP PFLTKTYDMV  60
DDPNTDSIMS WSSGNNSFVV WDPHAFATVL LPRHFKHSNF SSFVRQLNTY GFRKVDPDRW  120
EFANEGFLRG QRHLLKNIRR RKPPAHTASN QQSLGSYLEV GHFGYDAEID RLKRDKQLLM  180
AEVVKLRQEQ QNMKVHLKAM EDRLRGTEQK QQQMTSFMAR ILRNPEFLKQ LIAKNEMSKE  240
LHDAISKKRR RRIDGGPEAY AVGASSSNLE QESPVVFDSQ CSVELLVDGI PADLNGSGID  300
ANGVTEPQDF GLGTCEA
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1247252KKRRRR
2248253KRRRRI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G22830.11e-102HSF family protein