PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2BG012110.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family HSF
Protein Properties Length: 404aa    MW: 44876.3 Da    PI: 4.841
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2BG012110.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind112.52.9e-35441342101
                       HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXX CS
      HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkell 94 
                       Fl+k+y++++d+++++++sws+ +nsfvv+d++ fa+ +Lp++Fkhsnf+SFvRQLn+YgF+kv+ ++         weF+++ F +g+++ll
  TRIDC2BG012110.1  44 FLTKTYDMVDDPNTDSIMSWSSGNNSFVVWDPHAFATVLLPRHFKHSNFSSFVRQLNTYGFRKVDPDR---------WEFANEGFLRGQRHLL 127
                       9****************************************************************999.........**************** PP

                       XXXXXXX CS
      HSF_DNA-bind  95 ekikrkk 101
                       ++i+r+k
  TRIDC2BG012110.1 128 KNIRRRK 134
                       *****98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 404 aa     Download sequence    
MDPVPSLVKE EEEEEGAHGR GDSPGARAAP RPMEGLHDAG PPPFLTKTYD MVDDPNTDSI  60
MSWSSGNNSF VVWDPHAFAT VLLPRHFKHS NFSSFVRQLN TYGFRKVDPD RWEFANEGFL  120
RGQRHLLKNI RRRKPPAHTA SNQQSLGSYL EVGHFGYDAE IDRLKRDKQL LMAEVVKLRQ  180
EQQNMKVHLK AMEDRLRGTE QKQQQMTSFM ARILRNPEFL KQLIAKNEMS KELHDAISKK  240
RRRRIDGGPE AYAVGASSSN LEQESPVVFD SHGSVELLAE GSVPVPVELL ADGIPPDLEG  300
SVALLDGIPP DLECSVELLV DGIPADLNGS GIDANGVTEP QDFGLGTCEA QQNRVPGLFH  360
DNFWEELLNK GLSGENDEPV NADGMDVLSE KMGYFIPNSP TLST
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1239244KKRRRR
2240245KRRRRI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G22830.11e-101HSF family protein