PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

TRIDC2BG011160.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

LBD

Protein Properties

Length: 175aa MW: 18537 Da PI: 9.2045

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2BG011160.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	46.6	1e-14	106	148	1	43
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvl 43 +CaaCk+l r+C+++Cv+ pyfp+ +p++fa vhk+F ++ TRIDC2BG011160.1 106 PCAACKLLLRRCSAGCVFVPYFPSGEPHRFASVHKVFALATSA 148 7************************************987655 PP

Sequence ? help Back to Top
Protein Sequence Length: 175 aa Download sequence
PRSILLTPRH RAPLFSRIAA LPSTLPWLSR LQQRLDLLVQ EGDESPDPAS AGTDPVAARP 60 DAPDPVAATW CRSPVRSSSA NWMEDVGRTE VQACGGREGG WGGASPCAAC KLLLRRCSAG 120 CVFVPYFPSG EPHRFASVHK VFALATSASS SSKVFGAAAP RRPDADPVAN GGRHR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G31320.1	9e-16	LBD family protein

Link Out ? help Back to Top
Ensembl	TRIDC2BG011160.1