PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC2BG007950.3 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | NAC | ||||||||
Protein Properties | Length: 383aa MW: 43328.9 Da PI: 7.0646 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 168.2 | 2.6e-52 | 15 | 143 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkev 92 l+pGfrFhPtdeelv++yLkkk+++k++++ e i+++diyk++PwdLpk + +++e+ewyf+++rd+ky+++ r+nr+t++g+Wkatg+d+++ TRIDC2BG007950.3 15 LMPGFRFHPTDEELVSFYLKKKIQQKPISI-ELIRQLDIYKFDPWDLPKlANTGGETEWYFYCPRDRKYRNSARPNRVTAAGFWKATGTDRPI 106 689***************************.89***************624445778************************************ PP NAM 93 lsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128 +s+ +++ vglkk+Lvfykgra +g ktdW+mhe+rl TRIDC2BG007950.3 107 YSSkGTRCVGLKKSLVFYKGRAARGIKTDWMMHEFRL 143 *9856667***************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 383 aa Download sequence |
RDMEGTDDVK SDEILMPGFR FHPTDEELVS FYLKKKIQQK PISIELIRQL DIYKFDPWDL 60 PKLANTGGET EWYFYCPRDR KYRNSARPNR VTAAGFWKAT GTDRPIYSSK GTRCVGLKKS 120 LVFYKGRAAR GIKTDWMMHE FRLPSLADPS LPKRPIDKTI PLNDSWTICR IFKKTSSMAA 180 QRALTHTWEP PLPGATKQDL FSAMQASHFP SESCSNSLQV AAAAPSSQFD SKYGFQGQQQ 240 FQKPNSTQEG GSSCKVISFN CSPSPQVLKG PIILPFQTQP PSQKPMLHTA PPLFFEAQFG 300 QPEQITGFVT ASSEDIDDEM SCRDQESSTM KHGDTFRMKN EWDAPGRLNF PFDLGADSSD 360 DWECNIPWES FLSPTVPAEI TQY |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G26870.1 | 9e-96 | NAC family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC2BG007950.3 |