PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2BG006570.9

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

NAC

Protein Properties

Length: 392aa MW: 43253.3 Da PI: 4.4241

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2BG006570.9	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	54.4	4.2e-17	20	130	10	128
NAM 10 tdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrd.kkyatgkrknratksgyWkatgkdkevlskkgelvg 101 +deelv ++L+++ ++++l++ +v+ +d++ ++P d + wy + d + y +g+ r++k gyWk + + ++++ g TRIDC2BG006570.9 20 SDEELV-RFLAERKAEDSLPE-NVLVGMDLTLIHPLDSS-----PGNIWYLNQSDDqQPYGNGESDIRKAKGGYWKCIDVLRIP-T-SKSTAG 103 79**.88988888888898.89*******9875.....4567887665541457799*********99875544.4.5789 PP NAM 102 lkktLvfykgrapkgektdWvmheyrl 128 +k +L fy+g+ap+g++t+W+mhey + TRIDC2BG006570.9 104 VKFSLEFYEGEAPSGKRTQWLMHEYLV 130 *************************75 PP

Sequence ? help Back to Top
Protein Sequence Length: 392 aa Download sequence
MCPPLGTPTG MNYSISDSWS DEELVRFLAE RKAEDSLPEN VLVGMDLTLI HPLDSSPGNI 60 WYLNQSDDQQ PYGNGESDIR KAKGGYWKCI DVLRIPTSKS TAGVKFSLEF YEGEAPSGKR 120 TQWLMHEYLV EQNDEANVQQ EYKSLCTIFM QGSKKLNTED ELLSLSTNAP SDHLESYLQY 180 LADMEEQNVA VNSKIVSSSQ QNSSSIEGKD IYEDYSTADG VDFVNALANE DYIEMKDLLS 240 SDGSASTSEF SSRRSEEYFD SDALLRELLN DQNTTREIHQ DCNHNIAGPT KSDCVVISPP 300 EQGLVHNHDN GAMVAGTSLE KAASDSERDQ HSNEQCLDPH PPVSSCSSNS HVEQSHSNGS 360 SSSHGSSTSP RRNRSIGKLG KIGKKYCCLG SF

Sequence ? help Back to Top

Protein Sequence Length: 392 aa Download sequence

MCPPLGTPTG MNYSISDSWS DEELVRFLAE RKAEDSLPEN VLVGMDLTLI HPLDSSPGNI  60
WYLNQSDDQQ PYGNGESDIR KAKGGYWKCI DVLRIPTSKS TAGVKFSLEF YEGEAPSGKR  120
TQWLMHEYLV EQNDEANVQQ EYKSLCTIFM QGSKKLNTED ELLSLSTNAP SDHLESYLQY  180
LADMEEQNVA VNSKIVSSSQ QNSSSIEGKD IYEDYSTADG VDFVNALANE DYIEMKDLLS  240
SDGSASTSEF SSRRSEEYFD SDALLRELLN DQNTTREIHQ DCNHNIAGPT KSDCVVISPP  300
EQGLVHNHDN GAMVAGTSLE KAASDSERDQ HSNEQCLDPH PPVSSCSSNS HVEQSHSNGS  360
SSSHGSSTSP RRNRSIGKLG KIGKKYCCLG SF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G17730.1	9e-18	NAC family protein

Link Out ? help Back to Top
Ensembl	TRIDC2BG006570.9