PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC2BG006570.8 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | NAC | ||||||||
Protein Properties | Length: 223aa MW: 24952.9 Da PI: 4.3057 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 56.2 | 1.2e-17 | 37 | 147 | 10 | 128 |
NAM 10 tdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrd.kkyatgkrknratksgyWkatgkdkevlskkgelvg 101 +deelv ++L+++ ++++l++ +v+ +d++ ++P d + wy + d + y +g+ r++k gyWk + + ++++ g TRIDC2BG006570.8 37 SDEELV-RFLAERKAEDSLPE-NVLVGMDLTLIHPLDSS-----PGNIWYLNQSDDqQPYGNGESDIRKAKGGYWKCIDVLRIP-T-SKSTAG 120 79****.88988888888898.89***********9875.....4567887665541457799*************99875544.4.5789** PP NAM 102 lkktLvfykgrapkgektdWvmheyrl 128 +k +L fy+g+ap+g++t+W+mhey + TRIDC2BG006570.8 121 VKFSLEFYEGEAPSGKRTQWLMHEYLV 147 *************************75 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 223 aa Download sequence |
LAQATPPTSP RFDSGTIMCP PLGTPTGMNY SISDSWSDEE LVRFLAERKA EDSLPENVLV 60 GMDLTLIHPL DSSPGNIWYL NQSDDQQPYG NGESDIRKAK GGYWKCIDVL RIPTSKSTAG 120 VKFSLEFYEG EAPSGKRTQW LMHEYLVEQN DEANVQQEYK SLCTIFMQGS KKLNTEDELL 180 SLSTNAPSDH LESYLQYLAD MEEQNVAVNS KVLYLQASKI ALQ |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G17730.1 | 1e-18 | NAC family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC2BG006570.8 |