PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2BG006570.6

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

NAC

Protein Properties

Length: 406aa MW: 44681.8 Da PI: 4.4321

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2BG006570.6	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	54.3	4.5e-17	34	144	10	128
NAM 10 tdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrd.kkyatgkrknratksgyWkatgkdkevlskkgelvg 101 +deelv ++L+++ ++++l++ +v+ +d++ ++P d + wy + d + y +g+ r++k gyWk + + ++++ g TRIDC2BG006570.6 34 SDEELV-RFLAERKAEDSLPE-NVLVGMDLTLIHPLDSS-----PGNIWYLNQSDDqQPYGNGESDIRKAKGGYWKCIDVLRIP-T-SKSTAG 117 79**.88988888888898.89*******9875.....4567887665541457799*********99875544.4.5789 PP NAM 102 lkktLvfykgrapkgektdWvmheyrl 128 +k +L fy+g+ap+g++t+W+mhey + TRIDC2BG006570.6 118 VKFSLEFYEGEAPSGKRTQWLMHEYLV 144 *************************75 PP

Sequence ? help Back to Top
Protein Sequence Length: 406 aa Download sequence
ATPPTSPRFD SGTIMCPPLG TPTGMNYSIS DSWSDEELVR FLAERKAEDS LPENVLVGMD 60 LTLIHPLDSS PGNIWYLNQS DDQQPYGNGE SDIRKAKGGY WKCIDVLRIP TSKSTAGVKF 120 SLEFYEGEAP SGKRTQWLMH EYLVEQNDEA NVQQEYKSLC TIFMQGSKKL NTEDELLSLS 180 TNAPSDHLES YLQYLADMEE QNVAVNSKIV SSSQQNSSSI EGKDIYEDYS TADGVDFVNA 240 LANEDYIEMK DLLSSDGSAS TSEFSSRRSE EYFDSDALLR ELLNDQNTTR EIHQDCNHNI 300 AGPTKSDCVV ISPPEQGLVH NHDNGAMVAG TSLEKAASDS ERDQHSNEQC LDPHPPVSSC 360 SSNSHVEQSH SNGSSSSHGS STSPRRNRSI GKLGKIGKKY CCLGSF

Sequence ? help Back to Top

Protein Sequence Length: 406 aa Download sequence

ATPPTSPRFD SGTIMCPPLG TPTGMNYSIS DSWSDEELVR FLAERKAEDS LPENVLVGMD  60
LTLIHPLDSS PGNIWYLNQS DDQQPYGNGE SDIRKAKGGY WKCIDVLRIP TSKSTAGVKF  120
SLEFYEGEAP SGKRTQWLMH EYLVEQNDEA NVQQEYKSLC TIFMQGSKKL NTEDELLSLS  180
TNAPSDHLES YLQYLADMEE QNVAVNSKIV SSSQQNSSSI EGKDIYEDYS TADGVDFVNA  240
LANEDYIEMK DLLSSDGSAS TSEFSSRRSE EYFDSDALLR ELLNDQNTTR EIHQDCNHNI  300
AGPTKSDCVV ISPPEQGLVH NHDNGAMVAG TSLEKAASDS ERDQHSNEQC LDPHPPVSSC  360
SSNSHVEQSH SNGSSSSHGS STSPRRNRSI GKLGKIGKKY CCLGSF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G17730.1	1e-17	NAC family protein

Link Out ? help Back to Top
Ensembl	TRIDC2BG006570.6