PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2BG006570.4

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

NAC

Protein Properties

Length: 395aa MW: 43623.7 Da PI: 4.4599

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2BG006570.4	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	54.4	4.3e-17	23	133	10	128
NAM 10 tdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrd.kkyatgkrknratksgyWkatgkdkevlskkgelvg 101 +deelv ++L+++ ++++l++ +v+ +d++ ++P d + wy + d + y +g+ r++k gyWk + + ++++ g TRIDC2BG006570.4 23 SDEELV-RFLAERKAEDSLPE-NVLVGMDLTLIHPLDSS-----PGNIWYLNQSDDqQPYGNGESDIRKAKGGYWKCIDVLRIP-T-SKSTAG 106 79**.88988888888898.89*******9875.....4567887665541457799*********99875544.4.5789 PP NAM 102 lkktLvfykgrapkgektdWvmheyrl 128 +k +L fy+g+ap+g++t+W+mhey + TRIDC2BG006570.4 107 VKFSLEFYEGEAPSGKRTQWLMHEYLV 133 *************************75 PP

Sequence ? help Back to Top
Protein Sequence Length: 395 aa Download sequence
RTIMCPPLGT PTGMNYSISD SWSDEELVRF LAERKAEDSL PENVLVGMDL TLIHPLDSSP 60 GNIWYLNQSD DQQPYGNGES DIRKAKGGYW KCIDVLRIPT SKSTAGVKFS LEFYEGEAPS 120 GKRTQWLMHE YLVEQNDEAN VQQEYKSLCT IFMQGSKKLN TEDELLSLST NAPSDHLESY 180 LQYLADMEEQ NVAVNSKIVS SSQQNSSSIE GKDIYEDYST ADGVDFVNAL ANEDYIEMKD 240 LLSSDGSAST SEFSSRRSEE YFDSDALLRE LLNDQNTTRE IHQDCNHNIA GPTKSDCVVI 300 SPPEQGLVHN HDNGAMVAGT SLEKAASDSE RDQHSNEQCL DPHPPVSSCS SNSHVEQSHS 360 NGSSSSHGSS TSPRRNRSIG KLGKIGKKYC CLGSF

Sequence ? help Back to Top

Protein Sequence Length: 395 aa Download sequence

RTIMCPPLGT PTGMNYSISD SWSDEELVRF LAERKAEDSL PENVLVGMDL TLIHPLDSSP  60
GNIWYLNQSD DQQPYGNGES DIRKAKGGYW KCIDVLRIPT SKSTAGVKFS LEFYEGEAPS  120
GKRTQWLMHE YLVEQNDEAN VQQEYKSLCT IFMQGSKKLN TEDELLSLST NAPSDHLESY  180
LQYLADMEEQ NVAVNSKIVS SSQQNSSSIE GKDIYEDYST ADGVDFVNAL ANEDYIEMKD  240
LLSSDGSAST SEFSSRRSEE YFDSDALLRE LLNDQNTTRE IHQDCNHNIA GPTKSDCVVI  300
SPPEQGLVHN HDNGAMVAGT SLEKAASDSE RDQHSNEQCL DPHPPVSSCS SNSHVEQSHS  360
NGSSSSHGSS TSPRRNRSIG KLGKIGKKYC CLGSF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G17730.1	9e-18	NAC family protein

Link Out ? help Back to Top
Ensembl	TRIDC2BG006570.4