PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC2BG006570.3 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | NAC | ||||||||
Protein Properties | Length: 321aa MW: 35741.2 Da PI: 4.1246 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 55 | 2.8e-17 | 20 | 130 | 10 | 128 |
NAM 10 tdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrd.kkyatgkrknratksgyWkatgkdkevlskkgelvg 101 +deelv ++L+++ ++++l++ +v+ +d++ ++P d + wy + d + y +g+ r++k gyWk + + ++++ g TRIDC2BG006570.3 20 SDEELV-RFLAERKAEDSLPE-NVLVGMDLTLIHPLDSS-----PGNIWYLNQSDDqQPYGNGESDIRKAKGGYWKCIDVLRIP-T-SKSTAG 103 79****.88988888888898.89***********9875.....4567887665541457799*************99875544.4.5789** PP NAM 102 lkktLvfykgrapkgektdWvmheyrl 128 +k +L fy+g+ap+g++t+W+mhey + TRIDC2BG006570.3 104 VKFSLEFYEGEAPSGKRTQWLMHEYLV 130 *************************75 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 321 aa Download sequence |
MCPPLGTPTG MNYSISDSWS DEELVRFLAE RKAEDSLPEN VLVGMDLTLI HPLDSSPGNI 60 WYLNQSDDQQ PYGNGESDIR KAKGGYWKCI DVLRIPTSKS TAGVKFSLEF YEGEAPSGKR 120 TQWLMHEYLV EQNDEANVQQ EYKSLCTIFM QGSKKLNTED ELLSLSTNAP SDHLESYLQY 180 LADMEEQNVA VNSKIVSSSQ QNSSSIEGKD IYEDYSTADG VDFVNALANE DYIEMKDLLS 240 SDGSASTSEF SSRRSEEYFD SDALLRELLN DQNTTREIHQ DCNHNIAGPT KSDCVVISPP 300 EQGLVHNHDN GAMVAGTSLE K |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G17730.1 | 4e-18 | NAC family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC2BG006570.3 |