PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2BG006570.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NAC
Protein Properties Length: 339aa    MW: 37553.2 Da    PI: 4.1364
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2BG006570.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM54.83.1e-173714710128
               NAM  10 tdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrd.kkyatgkrknratksgyWkatgkdkevlskkgelvg 101
                       +deelv ++L+++ ++++l++ +v+  +d++ ++P d         + wy   + d + y +g+   r++k gyWk     +   + ++++ g
  TRIDC2BG006570.2  37 SDEELV-RFLAERKAEDSLPE-NVLVGMDLTLIHPLDSS-----PGNIWYLNQSDDqQPYGNGESDIRKAKGGYWKCIDVLRIP-T-SKSTAG 120
                       79****.88988888888898.89***********9875.....4567887665541457799*************99875544.4.5789** PP

               NAM 102 lkktLvfykgrapkgektdWvmheyrl 128
                       +k +L fy+g+ap+g++t+W+mhey +
  TRIDC2BG006570.2 121 VKFSLEFYEGEAPSGKRTQWLMHEYLV 147
                       *************************75 PP
Sequence ? help Back to Top
Protein Sequence    Length: 339 aa     Download sequence    
LAQATPPTSP RFDSGTIMCP PLGTPTGMNY SISDSWSDEE LVRFLAERKA EDSLPENVLV  60
GMDLTLIHPL DSSPGNIWYL NQSDDQQPYG NGESDIRKAK GGYWKCIDVL RIPTSKSTAG  120
VKFSLEFYEG EAPSGKRTQW LMHEYLVEQN DEANVQQEYK SLCTIFMQGS KKLNTEDELL  180
SLSTNAPSDH LESYLQYLAD MEEQNVAVNS KIVSSSQQNS SSIEGKDIYE DYSTADGVDF  240
VNALANEDYI EMKDLLSSDG SASTSEFSSR RSEEYFDSDA LLRELLNDQN TTREIHQDCN  300
HNIAGPTKSD CVVISPPEQG LVHNHDNGAM VAGTSLEKA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G17730.15e-18NAC family protein