PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC2BG002030.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | FAR1 | ||||||||
Protein Properties | Length: 230aa MW: 26156 Da PI: 10.0166 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 51 | 5e-16 | 73 | 152 | 1 | 90 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fYn Y+ e+GF vr +ks+ + + + +++ vC + gk+ +e+++ ++r+gC+a++++ +++d+ w++++ + HnH+l+ TRIDC2BG002030.1 73 EFYNLYSWECGFGVRLAKSRLNVER-KRCMQEIVCACAGKPIRENSR---------SSRCGCNAMIRLLRSNDKGWYIAEHKDAHNHPLS 152 6*****************9999554.478899*******99886555.........99******************************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 230 aa Download sequence |
GMQLGPRCVL TSEATSGWTR RVRIGKAPEE REMNPNRKSA LELSLRAYAD KKDGPVLCPS 60 IGTSFDSIDE AYEFYNLYSW ECGFGVRLAK SRLNVERKRC MQEIVCACAG KPIRENSRSS 120 RCGCNAMIRL LRSNDKGWYI AEHKDAHNHP LSLTCGQKLH WKSHRHIDRY TKDLVKQLRD 180 NNVGLGKVFS IVGSFFGSVD NVPFTKRSLK TLCRKLNREQ SDMDAVKRAV |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G52520.1 | 2e-12 | FAR1 family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC2BG002030.1 |