PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | TRIDC2AG081520.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
|
||||||||
Family | GATA | ||||||||
Protein Properties | Length: 444aa MW: 48276.6 Da PI: 7.1395 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 49.7 | 5.1e-16 | 8 | 42 | 1 | 35 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 C +Cg+t+TplWR+gp ++ LCnaCG ++r +g+ TRIDC2AG081520.1 8 CGHCGVTSTPLWRNGPPDKPVLCNACGSRWRIRGT 42 9***************55555**********9987 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 444 aa Download sequence |
MAKKEGPCGH CGVTSTPLWR NGPPDKPVLC NACGSRWRIR GTLVNYTPAH RREDTGASEA 60 RPDKLKLKGQ KQPKKRPNRS IVKDEPWSDQ NFWKMGNADT SNRSGSGSAV SYSESCAPYG 120 SVDAREMAGS AQSHAWDSLV PSRKRSCVTR PKPSPVEELV EELNSILHEE KLYCLSAGST 180 EEDLLYHNET PVGSFEIGYG SVLLRHPNSK SAEEESEANS VPADSKSYIT SESYSGSASF 240 IAHSEIKGAS NSNAASEKLK WSPMETHDSA RRDELHYSNQ HILESADSAL VSVALEDKEV 300 GGLTKSSMRS LKRPYESQPQ SFTDAEVRAG TMRIASSRSG AMASSCQLRS SFLPKSGNAT 360 RASLNLFMLA PDKLSSMMNP SDKDSDQDSL LLEVPRNAPH PEAELLLCCP PPSQLSSVTV 420 TAASPPSNHS PGSASDQLRN RHQW |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G17570.3 | 4e-55 | GATA family protein |
Link Out ? help Back to Top | |
---|---|
Ensembl | TRIDC2AG081520.1 |