PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2AG081300.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NAC
Protein Properties Length: 304aa    MW: 33828.7 Da    PI: 6.4008
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2AG081300.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM167.64e-52141561128
               NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk...............kvkaeekewyfFskrdkkyatgkrknrat 78 
                       +ppGfrFhPt+eelv +yL++kv+++k++l ++i+evd+y++ePwdL++               + +++++ewyfFs +d+ky++g+r+nrat
  TRIDC2AG081300.4  14 VPPGFRFHPTQEELVGYYLARKVAAQKIDL-DIIQEVDLYRIEPWDLQEkcgggrsgrgarqmaEEEQSSSEWYFFSFKDRKYPSGTRTNRAT 105
                       69****************************.99**************955899999999985432222444********************** PP

               NAM  79 ksgyWkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
                       ++g+Wkatg+dk+v+s+ ++ ++g++ktLvfy+grap+g+ktdW++heyrl
  TRIDC2AG081300.4 106 AAGFWKATGRDKPVMSSrSRGVIGMRKTLVFYRGRAPNGRKTDWIIHEYRL 156
                       ***************9856678***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 304 aa     Download sequence    
LAMEQHNYQE ESCVPPGFRF HPTQEELVGY YLARKVAAQK IDLDIIQEVD LYRIEPWDLQ  60
EKCGGGRSGR GARQMAEEEQ SSSEWYFFSF KDRKYPSGTR TNRATAAGFW KATGRDKPVM  120
SSRSRGVIGM RKTLVFYRGR APNGRKTDWI IHEYRLQTNE HAPTQEEGWV VCRAFQKPAP  180
NQRPSYIFPA YPAAPGLGGY YDAQPWLHGQ GGDIHYLQST AGAASAGGVE FPGQGIQYPD  240
DVLESKQSLF GNIPQLIESP PTTTAVAGCG DAGYDIVQQG QGAAGIDWNF LDSLLSTSQL  300
HLQQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G71930.12e-86NAC family protein