PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC2AG081290.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | NAC | ||||||||
Protein Properties | Length: 175aa MW: 19954.3 Da PI: 9.3673 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 168.3 | 2.6e-52 | 13 | 155 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..............kvkaeek...ewyfFskrdkkyatgkrknr 76 +ppGfrFhPt+eelv +yL++kv++++++l +i+evd+y++ePwdL++ + a+e+ ewyfFs +d+ky++g r+nr TRIDC2AG081290.2 13 VPPGFRFHPTEEELVGYYLARKVAAQNIDL-GIIQEVDLYRTEPWDLQEkcgggrggrgtrqvT--ADEQsssEWYFFSFKDRKYPSGMRTNR 102 69****************************.99**************95589999999988542..3222345******************** PP NAM 77 atksgyWkatgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128 at++g+Wkatg+dk+v+s+ +++++g++ktLvfy+grap+g+ktdW++heyrl TRIDC2AG081290.2 103 ATAAGFWKATGRDKPVTSSrSRSVIGMRKTLVFYRGRAPNGRKTDWIIHEYRL 155 *****************98566779**************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 175 aa Download sequence |
MLAMDQHQEE SCVPPGFRFH PTEEELVGYY LARKVAAQNI DLGIIQEVDL YRTEPWDLQE 60 KCGGGRGGRG TRQVTADEQS SSEWYFFSFK DRKYPSGMRT NRATAAGFWK ATGRDKPVTS 120 SRSRSVIGMR KTLVFYRGRA PNGRKTDWII HEYRLQTSEH GPTQVSNSST NLLLD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G18060.1 | 2e-70 | NAC family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC2AG081290.2 |