PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Link Out |

Basic Information? help Back to Top

TF ID

TRIDC2AG076490.8

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

ARF

Protein Properties

Length: 747aa MW: 83140.6 Da PI: 7.1241

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2AG076490.8	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	73	3.6e-23	132	233	1	99
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-S CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldg 86 f+k+lt sd++++g +++p++ ae+ ++++++ +l+ +d + +W++++i+r++++r++lt+GW+ Fv+a++L +gD+v+F + TRIDC2AG076490.8 132 FCKTLTASDTSTHGGFSVPRRAAERVfppldftQQPPAQ--ELIARDIHDVEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFI--W 220 99*********************9*86555544..8********************************************..8 PP SSEE..EEEEE-S CS B3 87 rsefelvvkvfrk 99 +++ +l+++++r+ TRIDC2AG076490.8 221 NEKNQLWLGIRRA 233 999999***97 PP
2	Auxin_resp	110.6	1.6e-36	258	341	1	83
Auxin_resp 1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 aahaast+s F+++YnPra++seFv++++k+ ka+ +++svGmRf+m fete+ss rr++Gt++ vsd+dpvrW S Wrs+k TRIDC2AG076490.8 258 AAHAASTNSRFTIFYNPRACPSEFVIPLSKYIKAVFhTRISVGMRFRMLFETEESSVRRYMGTITEVSDADPVRWASSYWRSVK 341 79*****************************986599****************************************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 747 aa Download sequence
LAFLLPLVCL LSLLCVRAGA EKKNLNSELW HACAGPLVCL PTLGTRVVYF PQGHSEQVAA 60 STNKEVEGHI PNYPNLPPQL ICQLHDVTMH ADVETDEVYA QMTLQPLNPQ EQNDAYLPAE 120 MGIMSKQPTN YFCKTLTASD TSTHGGFSVP RRAAERVFPP LDFTQQPPAQ ELIARDIHDV 180 EWKFRHIFRG QPKRHLLTTG WSVFVSAKRL VAGDSVLFIW NEKNQLWLGI RRANRTQTVM 240 PSSVLSSDSM HIGLLAAAAH AASTNSRFTI FYNPRACPSE FVIPLSKYIK AVFHTRISVG 300 MRFRMLFETE ESSVRRYMGT ITEVSDADPV RWASSYWRSV KVGWDESTAG ERPPRVSLWE 360 IEPLTTFPMY PSLFPLRVKH PWYSGVAGLQ DDSNALMWLR GVAGDGGYQS MNFQSPGIGS 420 WGQQRLHPSL MSTDHDQYQA VVAAAAAASQ SGGYMKQQFL NLQQPMQSPQ EHCNLNPLLQ 480 QQILQQASQQ QTVSADSQNI QTMLNSSAIQ HQLQQLQQLQ QVHQVQQAQQ AHIDQKQKIQ 540 SDQTYHVPTS ASLPSPTSLP SHLREKFGFS DPNANSSSFT TSSSSDNMLE SNFLQGNSKA 600 VNLSRFNQPV ASDQQQQQQQ QQQQQAWKQK FMGSQSLSFG GSGLLNSPTS KDGSLESKIG 660 SDVQHQSLFS PQVDSSSLLY NMVPNMTSNV ADNNMSTIPS GSTYLQSPMY GCLDDSSGIF 720 QNTGENDPTS RTFVKVVVVR CIFLHQV

Sequence ? help Back to Top

Protein Sequence Length: 747 aa Download sequence

LAFLLPLVCL LSLLCVRAGA EKKNLNSELW HACAGPLVCL PTLGTRVVYF PQGHSEQVAA  60
STNKEVEGHI PNYPNLPPQL ICQLHDVTMH ADVETDEVYA QMTLQPLNPQ EQNDAYLPAE  120
MGIMSKQPTN YFCKTLTASD TSTHGGFSVP RRAAERVFPP LDFTQQPPAQ ELIARDIHDV  180
EWKFRHIFRG QPKRHLLTTG WSVFVSAKRL VAGDSVLFIW NEKNQLWLGI RRANRTQTVM  240
PSSVLSSDSM HIGLLAAAAH AASTNSRFTI FYNPRACPSE FVIPLSKYIK AVFHTRISVG  300
MRFRMLFETE ESSVRRYMGT ITEVSDADPV RWASSYWRSV KVGWDESTAG ERPPRVSLWE  360
IEPLTTFPMY PSLFPLRVKH PWYSGVAGLQ DDSNALMWLR GVAGDGGYQS MNFQSPGIGS  420
WGQQRLHPSL MSTDHDQYQA VVAAAAAASQ SGGYMKQQFL NLQQPMQSPQ EHCNLNPLLQ  480
QQILQQASQQ QTVSADSQNI QTMLNSSAIQ HQLQQLQQLQ QVHQVQQAQQ AHIDQKQKIQ  540
SDQTYHVPTS ASLPSPTSLP SHLREKFGFS DPNANSSSFT TSSSSDNMLE SNFLQGNSKA  600
VNLSRFNQPV ASDQQQQQQQ QQQQQAWKQK FMGSQSLSFG GSGLLNSPTS KDGSLESKIG  660
SDVQHQSLFS PQVDSSSLLY NMVPNMTSNV ADNNMSTIPS GSTYLQSPMY GCLDDSSGIF  720
QNTGENDPTS RTFVKVVVVR CIFLHQV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G30330.1	0.0	ARF family protein

Link Out ? help Back to Top
Ensembl	TRIDC2AG076490.8