PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2AG076490.5
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ARF
Protein Properties Length: 835aa    MW: 92804.7 Da    PI: 6.404
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2AG076490.5genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B372.84.3e-23137238199
                       EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-S CS
                B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldg 86 
                       f+k+lt sd++++g +++p++ ae+        ++++++  +l+ +d +  +W++++i+r++++r++lt+GW+ Fv+a++L +gD+v+F   +
  TRIDC2AG076490.5 137 FCKTLTASDTSTHGGFSVPRRAAERVfppldftQQPPAQ--ELIARDIHDVEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFI--W 225
                       99***********************9*****86555544..8************************************************..8 PP

                       SSEE..EEEEE-S CS
                B3  87 rsefelvvkvfrk 99 
                       +++ +l+++++r+
  TRIDC2AG076490.5 226 NEKNQLWLGIRRA 238
                       999999*****97 PP
2Auxin_resp110.41.9e-36263346183
        Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                       aahaast+s F+++YnPra++seFv++++k+ ka+  +++svGmRf+m fete+ss rr++Gt++ vsd+dpvrW  S Wrs+k
  TRIDC2AG076490.5 263 AAHAASTNSRFTIFYNPRACPSEFVIPLSKYIKAVFhTRISVGMRFRMLFETEESSVRRYMGTITEVSDADPVRWASSYWRSVK 346
                       79*******************************986599******************************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 835 aa     Download sequence    
MSSSSGASLG GQPPPAAPPE EGAGAEKKNL NSELWHACAG PLVCLPTLGT RVVYFPQGHS  60
EQVAASTNKE VEGHIPNYPN LPPQLICQLH DVTMHADVET DEVYAQMTLQ PLNPQEQNDA  120
YLPAEMGIMS KQPTNYFCKT LTASDTSTHG GFSVPRRAAE RVFPPLDFTQ QPPAQELIAR  180
DIHDVEWKFR HIFRGQPKRH LLTTGWSVFV SAKRLVAGDS VLFIWNEKNQ LWLGIRRANR  240
TQTVMPSSVL SSDSMHIGLL AAAAHAASTN SRFTIFYNPR ACPSEFVIPL SKYIKAVFHT  300
RISVGMRFRM LFETEESSVR RYMGTITEVS DADPVRWASS YWRSVKVGWD ESTAGERPPR  360
VSLWEIEPLT TFPMYPSLFP LRVKHPWYSG VAGLQDDSNA LMWLRGVAGD GGYQSMNFQS  420
PGIGSWGQQR LHPSLMSTDH DQYQAVVAAA AAASQSGGYM KQQFLNLQQP MQSPQEHCNL  480
NPLLQQQILQ QASQQQTVSA DSQNIQTMLN SSAIQHQLQQ LQQLQQVHQV QQAQQAHIDQ  540
KQKIQSDQTY HVPTSASLPS PTSLPSHLRE KFGFSDPNAN SSSFTTSSSS DNMLESNFLQ  600
GNSKAVNLSR FNQPVASDQQ QQQQQQQQQQ AWKQKFMGSQ SLSFGGSGLL NSPTSKDGSL  660
ESKIGSDVQH QSLFSPQVDS SSLLYNMVPN MTSNVADNNM STIPSGSTYL QSPMYGCLDD  720
SSGIFQNTGE NDPTSRTFVK VYKSGSVGRS LDITRFSNYA ELREELGQMY GIRGQLDDPD  780
RSGWQLVFVD RENDVLLLGD DPWESFVNSV WYIKILSPED VHKLGKQGND PRYLS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30330.10.0ARF family protein