PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2AG076490.10
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ARF
Protein Properties Length: 389aa    MW: 43808.2 Da    PI: 8.2902
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2AG076490.10genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B374.51.3e-23128229199
                        EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE- CS
                 B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkld 85 
                        f+k+lt sd++++g +++p++ ae+        ++++++  +l+ +d +  +W++++i+r++++r++lt+GW+ Fv+a++L +gD+v+F   
  TRIDC2AG076490.10 128 FCKTLTASDTSTHGGFSVPRRAAERVfppldftQQPPAQ--ELIARDIHDVEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFI-- 215
                        99***********************9*****86555544..8************************************************.. PP

                        SSSEE..EEEEE-S CS
                 B3  86 grsefelvvkvfrk 99 
                        ++++ +l+++++r+
  TRIDC2AG076490.10 216 WNEKNQLWLGIRRA 229
                        8999999*****97 PP
2Auxin_resp1126e-37254337183
         Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalk.vkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                        aahaast+s F+++YnPra++seFv++++k+ ka+  +++svGmRf+m fete+ss rr++Gt++ vsd+dpvrW  S Wrs+k
  TRIDC2AG076490.10 254 AAHAASTNSRFTIFYNPRACPSEFVIPLSKYIKAVFhTRISVGMRFRMLFETEESSVRRYMGTITEVSDADPVRWASSYWRSVK 337
                        79*******************************986599******************************************985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 389 aa     Download sequence    
LPLVCLLSLL CVRAGAEKKN LNSELWHACA GPLVCLPTLG TRVVYFPQGH SEQVAASTNK  60
EVEGHIPNYP NLPPQLICQL HDVTMHADVE TDEVYAQMTL QPLNPQEQND AYLPAEMGIM  120
SKQPTNYFCK TLTASDTSTH GGFSVPRRAA ERVFPPLDFT QQPPAQELIA RDIHDVEWKF  180
RHIFRGQPKR HLLTTGWSVF VSAKRLVAGD SVLFIWNEKN QLWLGIRRAN RTQTVMPSSV  240
LSSDSMHIGL LAAAAHAAST NSRFTIFYNP RACPSEFVIP LSKYIKAVFH TRISVGMRFR  300
MLFETEESSV RRYMGTITEV SDADPVRWAS SYWRSVKVGW DESTAGERPP RVSLWEIEPL  360
TTFPMYPSLF PLRVKHPWYS GVAGLQGTI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30330.10.0ARF family protein