PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2AG075070.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bHLH

Protein Properties

Length: 482aa MW: 51074 Da PI: 7.1245

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2AG075070.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	14.9	4.8e-05	367	404	12	54
HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 R +++ +++ L++l+ + +K + a++L +++eYIk L TRIDC2AG075070.2 367 RKEKLGDRITALQQLVSPF-----GKTDTASVLHETIEYIKFL 404 677888999*****998.....8**************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 482 aa Download sequence
ASPLSPPSSP CPPNKHSPLP CIWLSYPSEI DRSTKKRSGD QQIEEMGDHQ LMHAAPAMYS 60 GGGAGAVSHG MWWNSNATAG VPAAACSTEL AGFNSWPAGL AAGGYDVAGV DGGKQAKSCT 120 TTASSESPGN NSSITFQETA SINDPAAAGF ADWNNPYMSS GAGNMHGFLQ VGHHDMSSRT 180 DPQSMMNAVA APNNLDLALQ GHHHHQQQQQ QDDHQRQQQL LSSLGAPELL LSPNSPYGFQ 240 SSLLRSLIEP TGKPAPAAGL LQQYQYQQMG GQTGAREPLQ FTNDAAFWNQ SAGFGMGMAA 300 PPATDNTSVR LAKQPAPAPR GANLALKTVL EGVGDSSSIV TKKASGEPAF KKPRMETPSP 360 LPTFKVRKEK LGDRITALQQ LVSPFGKTDT ASVLHETIEY IKFLHDQVGV LSAPYLKSGH 420 HQHQVPQYLK SSSNGSPDKS CKDGGEVSLK GRGLCLVPIS STFAVASDVP VDFWNPFGPQ 480 FR

Sequence ? help Back to Top

Protein Sequence Length: 482 aa Download sequence

ASPLSPPSSP CPPNKHSPLP CIWLSYPSEI DRSTKKRSGD QQIEEMGDHQ LMHAAPAMYS  60
GGGAGAVSHG MWWNSNATAG VPAAACSTEL AGFNSWPAGL AAGGYDVAGV DGGKQAKSCT  120
TTASSESPGN NSSITFQETA SINDPAAAGF ADWNNPYMSS GAGNMHGFLQ VGHHDMSSRT  180
DPQSMMNAVA APNNLDLALQ GHHHHQQQQQ QDDHQRQQQL LSSLGAPELL LSPNSPYGFQ  240
SSLLRSLIEP TGKPAPAAGL LQQYQYQQMG GQTGAREPLQ FTNDAAFWNQ SAGFGMGMAA  300
PPATDNTSVR LAKQPAPAPR GANLALKTVL EGVGDSSSIV TKKASGEPAF KKPRMETPSP  360
LPTFKVRKEK LGDRITALQQ LVSPFGKTDT ASVLHETIEY IKFLHDQVGV LSAPYLKSGH  420
HQHQVPQYLK SSSNGSPDKS CKDGGEVSLK GRGLCLVPIS STFAVASDVP VDFWNPFGPQ  480
FR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G61660.3	8e-45	bHLH family protein

Link Out ? help Back to Top
Ensembl	TRIDC2AG075070.2