PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2AG072290.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 242aa    MW: 25886 Da    PI: 10.25
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2AG072290.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP253.36.9e-1769118255
               AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                       +y+GVr +k +g+WvAeIr+p +   r+r++lg++ t+  Aa+a++ a  +l+g
  TRIDC2AG072290.1  69 QYRGVRMRK-WGKWVAEIREPHK---RTRIWLGSYATPVAAARAYDTAVFYLRG 118
                       7******99.**********732...5*************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 242 aa     Download sequence    
QQGEYRSSSS SEGSAGSAAA AAAAAAMAPL AAAAAAVAAK EEHNVTVAVA PPMPMAMAMP  60
LQQQQPRKQY RGVRMRKWGK WVAEIREPHK RTRIWLGSYA TPVAAARAYD TAVFYLRGRS  120
ARLNFPDEIS ALALSSPEAA GAGGREEPGD GGGALSAASI RKKAIEVGSR VDALQTGMTT  180
MVAAPAHHRE RQRLHHHHHH AEPHGEELHR HVKQQRTAWN GRAKNPDLNQ APSPDTSDAE  240
AE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G23340.12e-44ERF family protein