PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2AG068320.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 372aa    MW: 39523.2 Da    PI: 9.0529
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2AG068320.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH15.43.4e-052572941254
                       HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
               HLH  12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                       R +++ +++  L++l+ +      +K + a++L +++eYIk L
  TRIDC2AG068320.1 257 RKEKLGDRITALQQLVSPF-----GKTDTASVLHETIEYIKFL 294
                       677888999*******998.....8****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 372 aa     Download sequence    
AADGGKAKSC TTTASSESPG NNSSVTFQET ASISDPAAGF TDWNSPYMSN GGAGNMHGFL  60
QVGHHDMSSR TDQQSHMNAS SMLNDPSANK LDLALQGHQQ AGDHHRQQKL LSSLGAPELL  120
LSPNSPYGFQ SSSLLRSLLE PMAKPAPAAG IQQYQYQQMG GQAGVREPLQ FTNDAAFWNP  180
SAGFGMAMPA PAVSEQTSVR AVKRPSPAPR GANLALKSVL EGVGDSSSIV TKKANSEPAF  240
KKPRTETPSS LPTFKVRKEK LGDRITALQQ LVSPFGKTDT ASVLHETIEY IKFLHDQAGV  300
LSAPYLKRGH HQHQVPQYLK SSSASPDKSC KDGSGEVSLK GRGLCLVPIS STFAVASDGP  360
VDFWTPFGGQ FR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G61660.33e-46bHLH family protein