PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2AG065490.6
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GRAS
Protein Properties Length: 489aa    MW: 51535.4 Da    PI: 8.8069
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2AG065490.6genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS192.92.1e-591154882374
              GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlar.svselykalppsetsekn......sseelaalkl.... 83 
                       ++lL  cA av++++l+++q+l   l ela+ +gd+++Rlaay ++AL+ rl    ++  ++a+++ ++ e+        + +l+   +    
  TRIDC2AG065490.6 115 EQLLGPCAVAVEARNLSRVQHLFYVLGELAAFSGDANHRLAAYGLRALSLRLPAaVGPAAAAAVRVPAACESPtpsfagAEPRLFR--Aslik 205
                       689999**********************************************9956677777775544443333445542222222..13479 PP

              GRAS  84 fsevsPilkfshltaNqaIleavege.ervHiiDfdisqGlQWpaLlqaLasRp..egppslRiTgvgspesg..skeeleetgerLakfAee 171
                       f+evsP++++ + +aN aI + ++ + + +H +D+++s+G+QWp+Ll++L+  +  + pps+R+T+v+ p      +      +  L ++A++
  TRIDC2AG065490.6 206 FHEVSPWFTLPNTLANAAISQLASAApRPLHLVDIGVSHGVQWPTLLESLTRMAagRAPPSVRLTVVATPPVPfsASPPGYDFAPHLLRYAKS 298
                       ***********************9997889********************9888667799********976557888899999********** PP

              GRAS 172 lgvpfefnvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyy 264
                       +++++e+    a++l+    + + ++p+Eal+V+l+++l ++       ++er+++++ v++l+P++vv++e ++  n++  + +f+  le  
  TRIDC2AG065490.6 299 IKLDLEIGR--ASSLD--PAHGFCTSPDEALVVCLQFRLGHVT------AEERTDIIRRVRDLKPHLVVLSELDVGGNGS-AAGEFTARLELL 380
                       *******97..33333..346799999************9997......445889*******************998765.5999******** PP

              GRAS 265 salfdsleaklpres.eerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveee.. 354
                       + +++s++a +   + e+r+ +E+e     +  +va + a+   +    e Wr+r+ +aGF++v+++ +a+++a++llrk++ +g+++     
  TRIDC2AG065490.6 381 WRFLESTHAAFKGRDgEDRRLLEAE-----AGTAVAVAAAR---EAMGREGWRDRMAAAGFEQVAFGGEAVESARSLLRKYD-NGWEMSTAaa 464
                       *******888744443555555555.....66666666665...3345789*******************************.5555553334 PP

              GRAS 355 ....sgslvlgWkdrpLvsvSaWr 374
                            g++ l Wk++p+ ++S Wr
  TRIDC2AG065490.6 465 atggGGAVALRWKGQPVSFCSLWR 488
                       666566666**************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 489 aa     Download sequence    
VSLLAGDIDL GGSYGWWCDI LPAQKDDIGS VVAQTLSPPA PPATSSPLAH PSPSIASPAP  60
SEPSPKKRKS PAHVVSGSGH SSSSNQRRRT EQDRPGGGGK KGGGAGSDRD ARWAEQLLGP  120
CAVAVEARNL SRVQHLFYVL GELAAFSGDA NHRLAAYGLR ALSLRLPAAV GPAAAAAVRV  180
PAACESPTPS FAGAEPRLFR ASLIKFHEVS PWFTLPNTLA NAAISQLASA APRPLHLVDI  240
GVSHGVQWPT LLESLTRMAA GRAPPSVRLT VVATPPVPFS ASPPGYDFAP HLLRYAKSIK  300
LDLEIGRASS LDPAHGFCTS PDEALVVCLQ FRLGHVTAEE RTDIIRRVRD LKPHLVVLSE  360
LDVGGNGSAA GEFTARLELL WRFLESTHAA FKGRDGEDRR LLEAEAGTAV AVAAAREAMG  420
REGWRDRMAA AGFEQVAFGG EAVESARSLL RKYDNGWEMS TAAAATGGGG AVALRWKGQP  480
VSFCSLWRP
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
196104GGGGKKGGG
297105GGGGKKGGG
398106GGGGKKGGG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G13840.12e-94GRAS family protein