PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2AG064060.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bHLH

Protein Properties

Length: 294aa MW: 31771.3 Da PI: 8.6235

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2AG064060.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	42.5	1.1e-13	90	141	1	55
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 +r++h ++Er+RR+++N+ ++ Lr+l+P++ ++ + + a+i+ A++++k+L+ TRIDC2AG064060.1 90 QRMTHIAVERNRRRQMNEYLAVLRSLMPES---YAHRGDQASIVGGAIDFVKELE 141 79**************************...9****************995 PP

Sequence ? help Back to Top
Protein Sequence Length: 294 aa Download sequence
IGMTLDALCA AGDVLVYDTF NAAAAVSAAP AESSLLFCDV AGAAWMAGSA AAEAPAVTIV 60 PVEEGEKAQG RRKRRRRARS CKNREDAESQ RMTHIAVERN RRRQMNEYLA VLRSLMPESY 120 AHRGDQASIV GGAIDFVKEL EQLLQSLEAQ KRTLLAQPQQ EHKPLPIRDA MPSSSKTVTA 180 AATTTTSSGS GEGKQASAMR EGMGPPFAGF FTYPQYVCRL PPRDDADDRA GAADIEVTLV 240 ETHANVRVMA PRRPGQLLRM VAGMEALRLT VLHLNVTTLG SLALYSLSVK VHFH

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	71	77	RRKRRRR
2	72	76	RKRRR
3	72	79	RKRRRRAR
4	91	102	RMTHIAVERNRR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G22490.1	4e-52	bHLH family protein

Link Out ? help Back to Top
Ensembl	TRIDC2AG064060.1