PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2AG063470.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bHLH

Protein Properties

Length: 535aa MW: 59426.8 Da PI: 5.7557

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2AG063470.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	32.8	1.3e-10	334	380	3	54
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 +a+ + Er RR+++N ++ +Lr l P++ +K++ a+++ A+eYI +L TRIDC2AG063470.1 334 KANFATERERREQLNVKYKTLRMLFPNP-----TKNDRASVVGDAIEYIDEL 380 68899*********************.....9*************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 535 aa Download sequence
MGLLYTEEQT ATLHSLKLHG STSFATTKTA RPTAISTSDR ILSAAAAFLL SHFFPLIWIE 60 GARHCFVKMI VGGDYFEGSH DHNLMTGSLT HDSSLAPKCN DNTNIELQRF KVQSFSADIL 120 SDSTNLSSEA ARAINHLQHQ LGIGLEQDMR PVETATWDTS ICTIQDQIIN HQLSEDPQNI 180 LVQQQIQQYD PALYPNSGYT PAPDLLNLLH CTVAPVFPAT ASVFGDTALS GGTNYLDLNG 240 EFTGVAAIPD SGLMYTSDPA LQLGYHAAQS HALNDICHSL PQNYGLFPSE DERDAMLGVG 300 SVGGDLFQDM DDRQFDTVLE GRRGKGEFGK GKGKANFATE RERREQLNVK YKTLRMLFPN 360 PTKNDRASVV GDAIEYIDEL NRTVKELKIL VEQKWHGTNR RKIRKLDEEA AADGESSSMR 420 PIRDEQDNQL DGAIRSSWVQ RRSRECHVDV RIVENEINIK LTEKKKTNSS LLHVAKVLDE 480 FHLEIIHVVG GIIGDHYIFM FNTKVSEGSS IYACAVAKRI LQAVDAQHQA LDIFN

Sequence ? help Back to Top

Protein Sequence Length: 535 aa Download sequence

MGLLYTEEQT ATLHSLKLHG STSFATTKTA RPTAISTSDR ILSAAAAFLL SHFFPLIWIE  60
GARHCFVKMI VGGDYFEGSH DHNLMTGSLT HDSSLAPKCN DNTNIELQRF KVQSFSADIL  120
SDSTNLSSEA ARAINHLQHQ LGIGLEQDMR PVETATWDTS ICTIQDQIIN HQLSEDPQNI  180
LVQQQIQQYD PALYPNSGYT PAPDLLNLLH CTVAPVFPAT ASVFGDTALS GGTNYLDLNG  240
EFTGVAAIPD SGLMYTSDPA LQLGYHAAQS HALNDICHSL PQNYGLFPSE DERDAMLGVG  300
SVGGDLFQDM DDRQFDTVLE GRRGKGEFGK GKGKANFATE RERREQLNVK YKTLRMLFPN  360
PTKNDRASVV GDAIEYIDEL NRTVKELKIL VEQKWHGTNR RKIRKLDEEA AADGESSSMR  420
PIRDEQDNQL DGAIRSSWVQ RRSRECHVDV RIVENEINIK LTEKKKTNSS LLHVAKVLDE  480
FHLEIIHVVG GIIGDHYIFM FNTKVSEGSS IYACAVAKRI LQAVDAQHQA LDIFN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G31210.1	4e-44	bHLH family protein

Link Out ? help Back to Top
Ensembl	TRIDC2AG063470.1