PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2AG060480.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 856aa MW: 97114.2 Da PI: 8.9088

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2AG060480.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	66.8	5.7e-21	195	278	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 k+Y +YA +vGFsvrk k+ ++g +r +vCs+eg+r+++ k r+ +etrtgC a++ + ++ +gk++vt+++++HnH+la TRIDC2AG060480.1 195 KYYVSYAGNVGFSVRKGLWDKTAKSG-SRSRFYVCSREGFRAKNLPK-----RPYPETRTGCPARFSIMLTPSGKYRVTEFVQDHNHQLA 278 69******************8888.8999*******98877.....9*********************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 856 aa Download sequence
LRSQTMATTS GGGAAGDPAA SSPAPSQPQH PTPRISHIVR TYLDLSSNSK KRRAARKNQL 60 KPGGVETSAA GENKGCGPSG AASLEHSRLL RELGIRVSRY TNEERRDIIT RYMQKRSGRQ 120 GVNRAAAKVP SRQALAERRR RSVGGQFLGK EDPQTADKPE EKAEEEPELP PEVVANAGGV 180 PIIGMVFESE EKACKYYVSY AGNVGFSVRK GLWDKTAKSG SRSRFYVCSR EGFRAKNLPK 240 RPYPETRTGC PARFSIMLTP SGKYRVTEFV QDHNHQLAGP IDIGMLKSQR LLSKVQSGNG 300 NAISIPPRYK NYLRTKPTKD MNAGDFRDLT DYFRSMKSDN PSFYYAIQVD ENDKAANVFW 360 ADARSIFDYH YFSDVICFDM TYKLNDYSRP LALFLGINHH RQMVIFGAAF LYDETAESFK 420 WLLETFKVAM CGKQPKTILT DQSAALKEAL DLAWPGTVHR YCLWQIYQDA VKSLAHVFCI 480 SEEFTHDFSH CVFDVEDGQE FVETWNVIME KYNLKENKLL NELYEDRENW ALPYGRQIFS 540 GDIKSMVRAE TLGIRMKEYL DCEKELSPFL KFFESSVEKR RQEEIQADYQ ASQREPRTPL 600 PLLWQAANLY TPINFELFRK EYEECMDCMV YGCGEFGSLS EYMITFKNRT KEQLVRFDSS 660 DGTVACTCKK FETAGILCCH ILKVYELKNV KEIPLQYLLK RWSKDAKLGT VHEINGFSFD 720 SHIGSCVPER YAALCRLFYK IASKAAANVE TFSMVASQSD QLNEGIERTL QSTLAAKSSV 780 VHSIKDQLTR MVQNDYPLGN SSEPQKSTGK KMSEVTRRGN CQETNKRQKQ RKGVSADYFF 840 IDGILAKQLQ DQGKGK

Sequence ? help Back to Top

Protein Sequence Length: 856 aa Download sequence

LRSQTMATTS GGGAAGDPAA SSPAPSQPQH PTPRISHIVR TYLDLSSNSK KRRAARKNQL  60
KPGGVETSAA GENKGCGPSG AASLEHSRLL RELGIRVSRY TNEERRDIIT RYMQKRSGRQ  120
GVNRAAAKVP SRQALAERRR RSVGGQFLGK EDPQTADKPE EKAEEEPELP PEVVANAGGV  180
PIIGMVFESE EKACKYYVSY AGNVGFSVRK GLWDKTAKSG SRSRFYVCSR EGFRAKNLPK  240
RPYPETRTGC PARFSIMLTP SGKYRVTEFV QDHNHQLAGP IDIGMLKSQR LLSKVQSGNG  300
NAISIPPRYK NYLRTKPTKD MNAGDFRDLT DYFRSMKSDN PSFYYAIQVD ENDKAANVFW  360
ADARSIFDYH YFSDVICFDM TYKLNDYSRP LALFLGINHH RQMVIFGAAF LYDETAESFK  420
WLLETFKVAM CGKQPKTILT DQSAALKEAL DLAWPGTVHR YCLWQIYQDA VKSLAHVFCI  480
SEEFTHDFSH CVFDVEDGQE FVETWNVIME KYNLKENKLL NELYEDRENW ALPYGRQIFS  540
GDIKSMVRAE TLGIRMKEYL DCEKELSPFL KFFESSVEKR RQEEIQADYQ ASQREPRTPL  600
PLLWQAANLY TPINFELFRK EYEECMDCMV YGCGEFGSLS EYMITFKNRT KEQLVRFDSS  660
DGTVACTCKK FETAGILCCH ILKVYELKNV KEIPLQYLLK RWSKDAKLGT VHEINGFSFD  720
SHIGSCVPER YAALCRLFYK IASKAAANVE TFSMVASQSD QLNEGIERTL QSTLAAKSSV  780
VHSIKDQLTR MVQNDYPLGN SSEPQKSTGK KMSEVTRRGN CQETNKRQKQ RKGVSADYFF  840
IDGILAKQLQ DQGKGK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-106	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC2AG060480.1