PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2AG059920.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 290aa    MW: 30709 Da    PI: 6.0515
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2AG059920.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.63.6e-1998148155
               AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                       + y+GVr+++ +g+Wv+eIr+p++   + r++lg+f tae+Aa+a++ a+++++g
  TRIDC2AG059920.1  98 PSYRGVRRRS-WGKWVSEIREPRK---KSRIWLGTFPTAEMAARAHDVAALAIKG 148
                       57*****887.**********843...6***********************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 290 aa     Download sequence    
MEADASHAPT TSSSSVSSST LSTSSSSSSL ATSALELPKS PKPKHPKKRK RAASDREQDA  60
AANTNGVRGD ESSCCSTDED FAAASVKAAV PKSGFKHPSY RGVRRRSWGK WVSEIREPRK  120
KSRIWLGTFP TAEMAARAHD VAALAIKGRS AHLNFPELAH ELPRPDSTSP ADIQAAAAKA  180
AATAAVQCEA EPEHEHEPET PSSSSGAVSE TPEAAACAEA APADSGEVDN ALFDLPDLLL  240
DLRDGLFWSP VWPAALAAEE YDGGCCVGLS EPLLWAESFA RHDGLPRKRR
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
14150PKPKHPKKRK
24450KHPKKRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44940.11e-43ERF family protein