PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

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Basic Information? help Back to Top

TF ID

TRIDC2AG059100.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bHLH

Protein Properties

Length: 532aa MW: 59188.1 Da PI: 5.0105

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2AG059100.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	39.8	8.2e-13	369	416	3	55
HHHHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHHH CS HLH 3 rahnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksLq 55 ++h + ErrRR+++N+ f L++l+P+ K++Ka+iL +++ Y+++L+ TRIDC2AG059100.2 369 KNHVISERRRREKLNEMFLILKSLVPSiH------KVDKASILAETITYLRELE 416 6899*********************66......**************995 PP

Sequence ? help Back to Top
Protein Sequence Length: 532 aa Download sequence
MKEGNSVVMA LPVVRPCQEE PTLPPPTGTQ FSNQLAAAVR SINWSYAIFW SISTSRPGVL 60 TWKDGFYNGE IKTRKVTSSA DITADQLVLQ RSEQLRELYE SLLSGQCDHR ARRPAAALSP 120 EDLGDAEWYY TVCMGYAFRP GQGLPGRSFA SNEHVWLCNA QCADTKTFQR ALLAKVLEDK 180 GMVNWIGTSF WELKFPTCSK SEEPNSIPSV DDTGDADIVF DVLNHNTMAM MIPRELELGE 240 VECLSDDNLE RITKEINGFY GLYDELDVGA LEENWTMGGC FEIMSSPEVP PARAATNGIT 300 NGAVTLSSVE PSRSSCFTAW KRSWDSAEDM ATLVARETQK LLKKALAGGA WENNGGDDTA 360 RAQESTNTKN HVISERRRRE KLNEMFLILK SLVPSIHKVD KASILAETIT YLRELEQKVE 420 ELGSNRAAIT TAVRKRHEVG GKKVLARSKR KASELGGDDT ERVLPKDDGL SSVINITVTD 480 NEVLLEVQCR WKELLMTQVF DAIKSLRLDV LSVRASTPDD LLALKIRAQV WE

Sequence ? help Back to Top

Protein Sequence Length: 532 aa Download sequence

MKEGNSVVMA LPVVRPCQEE PTLPPPTGTQ FSNQLAAAVR SINWSYAIFW SISTSRPGVL  60
TWKDGFYNGE IKTRKVTSSA DITADQLVLQ RSEQLRELYE SLLSGQCDHR ARRPAAALSP  120
EDLGDAEWYY TVCMGYAFRP GQGLPGRSFA SNEHVWLCNA QCADTKTFQR ALLAKVLEDK  180
GMVNWIGTSF WELKFPTCSK SEEPNSIPSV DDTGDADIVF DVLNHNTMAM MIPRELELGE  240
VECLSDDNLE RITKEINGFY GLYDELDVGA LEENWTMGGC FEIMSSPEVP PARAATNGIT  300
NGAVTLSSVE PSRSSCFTAW KRSWDSAEDM ATLVARETQK LLKKALAGGA WENNGGDDTA  360
RAQESTNTKN HVISERRRRE KLNEMFLILK SLVPSIHKVD KASILAETIT YLRELEQKVE  420
ELGSNRAAIT TAVRKRHEVG GKKVLARSKR KASELGGDDT ERVLPKDDGL SSVINITVTD  480
NEVLLEVQCR WKELLMTQVF DAIKSLRLDV LSVRASTPDD LLALKIRAQV WE

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	375	380	ERRRRE
2	376	381	RRRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G09820.1	4e-68	bHLH family protein

Link Out ? help Back to Top
Ensembl	TRIDC2AG059100.2