PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC2AG058460.5 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | Nin-like | ||||||||
Protein Properties | Length: 168aa MW: 19110 Da PI: 7.4601 | ||||||||
Description | Nin-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | RWP-RK | 82.6 | 3.8e-26 | 93 | 142 | 3 | 52 |
RWP-RK 3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 ++i+l d++ yF+lpi++A++ L++++++LK++CRqyGI+RWPhRkiksl TRIDC2AG058460.5 93 ASITLADIAPYFHLPIREASRALKIGVSILKQKCRQYGIPRWPHRKIKSL 142 78**********************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 168 aa Download sequence |
PMLCPFRNPG LVCVPSLYND LYMVYQFQKF QQAPELVKRD SDEKSTRLEA EDKTSDVEVK 60 EESGSDSDED PQSGEELPAH VERRRRAKKQ HIASITLADI APYFHLPIRE ASRALKIGVS 120 ILKQKCRQYG IPRWPHRKIK SLDSLISDLE VNLAAPSLPL CLIIHLCS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G35590.1 | 7e-28 | Nin-like family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC2AG058460.5 |