PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2AG058460.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family Nin-like
Protein Properties Length: 340aa    MW: 38753.4 Da    PI: 9.3192
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2AG058460.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK80.91.3e-25202251352
            RWP-RK   3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 
                       ++i+l d++ yF+lpi++A++ L++++++LK++CRqyGI+RWPhRkiksl
  TRIDC2AG058460.4 202 ASITLADIAPYFHLPIREASRALKIGVSILKQKCRQYGIPRWPHRKIKSL 251
                       78**********************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 340 aa     Download sequence    
MDAAAAAVTT LSALAVFAST LHQGAVRSVH GYRVVAMGGR CAWDRWVERE FAFSPTSCRE  60
VPLPAAAPRI LPVEWRGRPA YREGQVLGAW RCVLAFDSIA AVPLPPTPPP MLCPFRNPGL  120
VCVPSLYNDL YMVYQFQKFQ QAPELVKRDS DEKSTRLEAE DKTSDVEVKE ESGSDSDEDP  180
QSGEELPAHV ERRRRAKKQH IASITLADIA PYFHLPIREA SRALKIGVSI LKQKCRQYGI  240
PRWPHRKIKS LDSLISDLED DTDGDVVQKE TRRQREKEKE REKEKEKQEA IQALAKRKRL  300
LESEKEIIQQ KPALDLMAET KLFREDVFKR RYRAKRLPGQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35590.17e-37Nin-like family protein