PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2AG058430.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family Nin-like
Protein Properties Length: 337aa    MW: 38072.6 Da    PI: 8.3527
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2AG058430.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK84.87.8e-27203252352
            RWP-RK   3 keisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 
                       ++i+led+ +yF+lpi++A+++L+++l++LK++CRqyGI+RWPhRk+ksl
  TRIDC2AG058430.1 203 ASITLEDITQYFHLPIREASRTLKIGLSILKKKCRQYGIPRWPHRKLKSL 252
                       68**********************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 337 aa     Download sequence    
MEAPAAAAAA ASTLSALAVF VSTVDRGAVR SAHGYRVAGK GGGCGWERWV EREFAFTPTS  60
AREVPLPADA LRLLPADWRG RPVYREGQIA GPWRCILAFD FVAAVAPPPV PPPVLCPFRN  120
PRLMCVPSLY NDLTKVFQFQ KVEEKVPGLV QCDSDEKLTT SDAKDRVSVK QEAGSDTDEP  180
PQFGEDLLAP AEKQRRAHRE YIASITLEDI TQYFHLPIRE ASRTLKIGLS ILKKKCRQYG  240
IPRWPHRKLK SLDSLIHDLE FVIDDETERD GVKQEDHMQD EKENQDAIEA LAKRKRMLET  300
EKATIQQKPT LDLMAETKQF RQYVFKRKYR AKTLVSE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35590.11e-48Nin-like family protein