PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC2AG056640.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | GATA | ||||||||
Protein Properties | Length: 302aa MW: 33035.6 Da PI: 7.1527 | ||||||||
Description | GATA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GATA | 45.1 | 1.4e-14 | 7 | 41 | 1 | 35 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 C +Cg+t+TplWR+gp ++ LCnaCG ++r kg+ TRIDC2AG056640.1 7 CCHCGVTSTPLWRNGPTHKPVLCNACGSRWRTKGS 41 99**************99999***********997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 302 aa Download sequence |
MGKEGPCCHC GVTSTPLWRN GPTHKPVLCN ACGSRWRTKG SLENYTPMHS RDDIDADQPR 60 VSKLKPPTLR LEEQRQLKKR PSHSIRENGA FSDQNFWKMG DADPSRSSSG SALSYSESCA 120 PYGSADASEM TGSAQSHAWE SLVPSKKRSC VTRTKSSSVD MLVKDLHCIM HEEQLSYLSG 180 SSEEDLIYHS ATPVDSFEIG YGSMLLRSSN SKSAEEDSEA NSVPADNKSY LTSESYSGTA 240 SFVVHSESKG ASNSNASPEK PKWFPVHTHE IAKRGKLHYS KQHTLENVGS TLVSVALEVS 300 SL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G17570.3 | 1e-60 | GATA family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC2AG056640.1 |