PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2AG055910.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GATA
Protein Properties Length: 373aa    MW: 40359.2 Da    PI: 6.6726
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2AG055910.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA60.32.4e-19291325135
              GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                       Cs+Cg+ kTp+WR gp+g ktLCnaCG++y++ +l
  TRIDC2AG055910.2 291 CSHCGVQKTPQWRAGPEGAKTLCNACGVRYKSGRL 325
                       *******************************9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 373 aa     Download sequence    
MDALKGSSRQ EETPDEAAAA AEAPAAWGFA ERDGFSVEDL LDLEEFCEPD KDSADEPEEA  60
PAADVKEEKL NDGPNQPVVS YELAPPAPPA PEIVDLPAHD VEEELEWVSR IMDDSLSELP  120
PQPAPPASMM ASLAPRPPQH RLPQRHPLPQ RHPQDGAYRA LPSMSDPMRT PTICALSTEA  180
LVPVKAKRSK RSRASGWSLS GPAPDSTSSS STTTTSSCSS SASFSPYFLL DTPHFGASEL  240
MEEYNILPPP AKKSKHGKSS KQKVKKRGRK PKNLPAHPSS ATEATQSDRR CSHCGVQKTP  300
QWRAGPEGAK TLCNACGVRY KSGRLLPEYR PACSPTYVSS VHSNSHRKVL EMRRKKEDGP  360
LTVTATAPAV ASF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G66320.26e-40GATA family protein