PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2AG055610.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NAC
Protein Properties Length: 279aa    MW: 32457.1 Da    PI: 8.9467
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2AG055610.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM175.51.5e-5471361129
               NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..kvka.eekewyfFskrdkkyatgkrknratksgyWkatgkdk 90 
                       +ppGfrFhPtdeelv++yL+kkv+ k+++l ++ik+vd+yk+ePwdL++  k+ + ++++w+fFs++dkky+tg+r+nrat++g+Wkatg+dk
  TRIDC2AG055610.3   7 VPPGFRFHPTDEELVDYYLRKKVQLKRIDL-DIIKDVDLYKIEPWDLQErcKIGTeDQNDWFFFSHKDKKYPTGTRTNRATTAGFWKATGRDK 98 
                       69****************************.99**************953444442455********************************** PP

               NAM  91 evlskkgelvglkktLvfykgrapkgektdWvmheyrle 129
                       ++++ k+ lvg++ktLvfykgrap+g+k dW+mheyrle
  TRIDC2AG055610.3  99 PIYV-KHCLVGMRKTLVFYKGRAPNGQKLDWIMHEYRLE 136
                       ****.899*****************************85 PP
Sequence ? help Back to Top
Protein Sequence    Length: 279 aa     Download sequence    
MNAFSHVPPG FRFHPTDEEL VDYYLRKKVQ LKRIDLDIIK DVDLYKIEPW DLQERCKIGT  60
EDQNDWFFFS HKDKKYPTGT RTNRATTAGF WKATGRDKPI YVKHCLVGMR KTLVFYKGRA  120
PNGQKLDWIM HEYRLETNEN GAPHVRKLSW QAPKMCMLDE GWVVCKVFKK RVATVQRMAA  180
TDSAFWFNND HVAFMAPRVD SPRQAVHHLQ NAAYHHGHHQ TYHHPCKVEL EYHQLLPQEP  240
ASFLQLPQLE MPGLPDLIGA VAASLQPCNQ THDGQASRQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G12260.11e-101NAC family protein