PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC2AG052680.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB
Protein Properties Length: 260aa    MW: 29122.5 Da    PI: 6.3109
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC2AG052680.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding60.24.3e-192168148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                      +g+WTt+Ed+ll+d v+q+G g+W+++++  g++R++k+c++rw +yl
  TRIDC2AG052680.2 21 KGPWTTQEDKLLLDHVAQHGEGRWNSVSKLTGLKRSGKSCRLRWVNYL 68
                      79********************************************97 PP
2Myb_DNA-binding543.8e-1774118147
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                       rg++T++E+  +v+++ ++G++ W+tIar ++ gRt++++k++w+++
  TRIDC2AG052680.2  74 RGKMTPQEESTIVQLHSLWGNR-WSTIARSLP-GRTDNEIKNYWRTH 118
                       89********************.*********.************87 PP
Sequence ? help Back to Top
Protein Sequence    Length: 260 aa     Download sequence    
MAEAEGQLAA CWGKQDDEWR KGPWTTQEDK LLLDHVAQHG EGRWNSVSKL TGLKRSGKSC  60
RLRWVNYLRP DLKRGKMTPQ EESTIVQLHS LWGNRWSTIA RSLPGRTDNE IKNYWRTHYK  120
KGKPSKNIER ARARFLMQRR EMQQQQQQQQ QKLLLGQGKD VELASATAED DVDEKMTGNV  180
GPAATALADH GHEELIMQDV LDFLCPMSCA LLHSAGQSGS CGASTSEEYG STEDDGATWG  240
SLWNLEDVAH DGDGGACALW
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G13480.19e-63MYB family protein