PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2AG051020.4

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

Nin-like

Protein Properties

Length: 650aa MW: 71197 Da PI: 6.9142

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2AG051020.4	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	89	3.8e-28	274	325	1	52
RWP-RK 1 aekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 aek+i +++l+kyFs+++kdAAk+Lgvc+T+LKriCR +GI+RWP+Rki+++ TRIDC2AG051020.4 274 AEKNIGMDVLRKYFSGSLKDAAKSLGVCPTTLKRICRTHGISRWPSRKINKV 325 589***********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 650 aa Download sequence
MHCRAVNLET AKDCIDQKVY SANQKAAFTE ILDVLRAICH AHMLPLALTW VPSSNGSDGG 60 YVGHDSVLDS QSGKAILRIH ESACYVNDAK MQGFFHACTE THLEKGQGIA GRALKSNLPF 120 FSPNIREYGI KDYPLAHHAR KFGLHAAVAI RLRSTYTGDD DYILEFFLPI NCTGSEEQQM 180 LLNNLSSTMQ RICKSLRTVS EAEVDKVDAC TAVMYKATSG SCLPTGQSWS SSHGDQPATE 240 EAFQDLSLID KQGDMSEQAQ SSSMRLAEKK RSTAEKNIGM DVLRKYFSGS LKDAAKSLGV 300 CPTTLKRICR THGISRWPSR KINKVNRSLK KIQTVINSVH GVDSSLQYDP ATGSLVPAVS 360 LPEKTSFPSC DAVSSPSVGK TVDEKSGPKS EQGYSSPEGW ERDSCQLQRS DAQKGEGDEF 420 HMQTTKYSGS GEHGSYGPNI THHISSEGTQ GPLYPTGAVS ALHDKETGCI EPLPCVLPSI 480 KTTRDQIVGR NSPPMQQADI DMFDDREGRE HTHPSTSGMT DSSSGSASSH PTFKKNPARP 540 LKDKSSPALT VKATYNGDTV RFKFLPSMGW YHLLEEIAKR FKLLTGVFQL KYKDDEDEWV 600 IMANDSDLQE CVDVMDSMGT RNVKLQVRDL PCLISSSGSS SCLQLEGHNS

Sequence ? help Back to Top

Protein Sequence Length: 650 aa Download sequence

MHCRAVNLET AKDCIDQKVY SANQKAAFTE ILDVLRAICH AHMLPLALTW VPSSNGSDGG  60
YVGHDSVLDS QSGKAILRIH ESACYVNDAK MQGFFHACTE THLEKGQGIA GRALKSNLPF  120
FSPNIREYGI KDYPLAHHAR KFGLHAAVAI RLRSTYTGDD DYILEFFLPI NCTGSEEQQM  180
LLNNLSSTMQ RICKSLRTVS EAEVDKVDAC TAVMYKATSG SCLPTGQSWS SSHGDQPATE  240
EAFQDLSLID KQGDMSEQAQ SSSMRLAEKK RSTAEKNIGM DVLRKYFSGS LKDAAKSLGV  300
CPTTLKRICR THGISRWPSR KINKVNRSLK KIQTVINSVH GVDSSLQYDP ATGSLVPAVS  360
LPEKTSFPSC DAVSSPSVGK TVDEKSGPKS EQGYSSPEGW ERDSCQLQRS DAQKGEGDEF  420
HMQTTKYSGS GEHGSYGPNI THHISSEGTQ GPLYPTGAVS ALHDKETGCI EPLPCVLPSI  480
KTTRDQIVGR NSPPMQQADI DMFDDREGRE HTHPSTSGMT DSSSGSASSH PTFKKNPARP  540
LKDKSSPALT VKATYNGDTV RFKFLPSMGW YHLLEEIAKR FKLLTGVFQL KYKDDEDEWV  600
IMANDSDLQE CVDVMDSMGT RNVKLQVRDL PCLISSSGSS SCLQLEGHNS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G59580.1	1e-112	Nin-like family protein

Link Out ? help Back to Top
Ensembl	TRIDC2AG051020.4