PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC2AG051020.11

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

Nin-like

Protein Properties

Length: 639aa MW: 69974.6 Da PI: 6.894

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2AG051020.11	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	89.1	3.7e-28	263	314	1	52
RWP-RK 1 aekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 aek+i +++l+kyFs+++kdAAk+Lgvc+T+LKriCR +GI+RWP+Rki+++ TRIDC2AG051020.11 263 AEKNIGMDVLRKYFSGSLKDAAKSLGVCPTTLKRICRTHGISRWPSRKINKV 314 589***********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 639 aa Download sequence
VMSLYLQVYS ANQKAAFTEI LDVLRAICHA HMLPLALTWV PSSNGSDGGY VGHDSVLDSQ 60 SGKAILRIHE SACYVNDAKM QGFFHACTET HLEKGQGIAG RALKSNLPFF SPNIREYGIK 120 DYPLAHHARK FGLHAAVAIR LRSTYTGDDD YILEFFLPIN CTGSEEQQML LNNLSSTMQR 180 ICKSLRTVSE AEVDKVDACT AVMYKATSGS CLPTGQSWSS SHGDQPATEE AFQDLSLIDK 240 QGDMSEQAQS SSMRLAEKKR STAEKNIGMD VLRKYFSGSL KDAAKSLGVC PTTLKRICRT 300 HGISRWPSRK INKVNRSLKK IQTVINSVHG VDSSLQYDPA TGSLVPAVSL PEKTSFPSCD 360 AVSSPSVGKT VDEKSGPKSE QGYSSPEGWE RDSCQLQRSD AQKGEGDEFH MQTTKYSGSG 420 EHGSYGPNIT HHISSEGTQG PLYPTGAVSA LHDKETGCIE PLPCVLPSIK TTRDQIVGRN 480 SPPMQQADID MFDDREGREH THPSTSGMTD SSSGSASSHP TFKKNPARPL KDKSSPALTV 540 KATYNGDTVR FKFLPSMGWY HLLEEIAKRF KLLTGVFQLK YKDDEDEWVI MANDSDLQEC 600 VDVMDSMGTR NVKLQVRDLP CLISSSGSSS CLQLEGHNS

Sequence ? help Back to Top

Protein Sequence Length: 639 aa Download sequence

VMSLYLQVYS ANQKAAFTEI LDVLRAICHA HMLPLALTWV PSSNGSDGGY VGHDSVLDSQ  60
SGKAILRIHE SACYVNDAKM QGFFHACTET HLEKGQGIAG RALKSNLPFF SPNIREYGIK  120
DYPLAHHARK FGLHAAVAIR LRSTYTGDDD YILEFFLPIN CTGSEEQQML LNNLSSTMQR  180
ICKSLRTVSE AEVDKVDACT AVMYKATSGS CLPTGQSWSS SHGDQPATEE AFQDLSLIDK  240
QGDMSEQAQS SSMRLAEKKR STAEKNIGMD VLRKYFSGSL KDAAKSLGVC PTTLKRICRT  300
HGISRWPSRK INKVNRSLKK IQTVINSVHG VDSSLQYDPA TGSLVPAVSL PEKTSFPSCD  360
AVSSPSVGKT VDEKSGPKSE QGYSSPEGWE RDSCQLQRSD AQKGEGDEFH MQTTKYSGSG  420
EHGSYGPNIT HHISSEGTQG PLYPTGAVSA LHDKETGCIE PLPCVLPSIK TTRDQIVGRN  480
SPPMQQADID MFDDREGREH THPSTSGMTD SSSGSASSHP TFKKNPARPL KDKSSPALTV  540
KATYNGDTVR FKFLPSMGWY HLLEEIAKRF KLLTGVFQLK YKDDEDEWVI MANDSDLQEC  600
VDVMDSMGTR NVKLQVRDLP CLISSSGSSS CLQLEGHNS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G59580.1	1e-111	Nin-like family protein

Link Out ? help Back to Top
Ensembl	TRIDC2AG051020.11