PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | TRIDC2AG050440.2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
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Family | DBB | ||||||||
Protein Properties | Length: 252aa MW: 27003.2 Da PI: 4.669 | ||||||||
Description | DBB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-B_box | 22.5 | 2.4e-07 | 4 | 46 | 5 | 41 |
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg......Htvvp 41 C+ +e ++ C ++ lC+ C +++H H++ p TRIDC2AG050440.2 4 QCDACEGAAATVVCCADEAALCARCDVQIHAAnklaskHQRLP 46 6******99*********************6678888888877 PP | |||||||
2 | zf-B_box | 30.2 | 9.4e-10 | 54 | 93 | 4 | 37 |
zf-B_box 4 rkCpeHeekelqlfCedCqqllCedClleeHkg......H 37 ++C+ +++k++ fC d++ l+C+dC +++H + H TRIDC2AG050440.2 54 PRCDVCQDKPAFVFCVDDRALFCRDCDDSIHVQgtlsanH 93 89*****************************544555555 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 252 aa Download sequence |
MRIQCDACEG AAATVVCCAD EAALCARCDV QIHAANKLAS KHQRLPLEAA PGLPRCDVCQ 60 DKPAFVFCVD DRALFCRDCD DSIHVQGTLS ANHQRYIATG IHVGFSSVCS AHADTHPPPS 120 KPKAPPTAAP PRAAPVSAAA QEVPSSPFLP SSGWAVEDLL QFSDYESSDK SPSPLGFKEL 180 EWFADIDLFH DDQAPAPKWG RTAAEVPELF ASPQPASNTG FYKAAGARQS KKARVEMPDD 240 DDEDYLLVPD LG |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G06040.1 | 2e-60 | DBB family protein |
Link Out ? help Back to Top | |
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Ensembl | TRIDC2AG050440.2 |