PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Link Out |

Basic Information? help Back to Top

TF ID

TRIDC2AG050150.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 737aa MW: 84421.4 Da PI: 8.7324

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC2AG050150.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	73.9	3.4e-23	49	139	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk..tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fY++YA+++GF+vr+ ++k +++ + ++f+Cs+eg+r+++ k+ +e+++r+ ++tr+gC+a+++vk + ++++v++l ++HnH l+ TRIDC2AG050150.1 49 EFYKSYARHCGFKVRVGQHKLL-NKEVVQFKRFMCSREGFRSDKGKDpsSERKKRNVKVTRCGCNAHIVVKWCSGNTYKVSSLIEHHNHGLV 139 6**************99887.777799************9987888889999*****************************986 PP
2	FAR1	73	6.6e-23	187	279	1	91
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk...tekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fY++YA+++GFsvr+ + k +n+ + +++f+Cs+eg+r+e+ +++r+ r++tr+gC+a++ vk+ +d+k+++t+ ++HnH ++ TRIDC2AG050150.1 187 EFYKSYAHHCGFSVRVGQRKLL-NNEVVQWKRFMCSREGFRSEKCMGvddPSRKRKVRKVTRCGCDARIIVKRCTDNKYKITSWIEHHNHGFV 278 6**************97766.8999************9887777889999********************************987 PP FAR1 91 p 91 p TRIDC2AG050150.1 279 P 279 5 PP

Sequence ? help Back to Top
Protein Sequence Length: 737 aa Download sequence
MWLRCAYLRQ ALQRSNRGAS EKEKVIPECD EALRPSLGMA FEGLSSAEEF YKSYARHCGF 60 KVRVGQHKLL NKEVVQFKRF MCSREGFRSD KGKDPSSERK KRNVKVTRCG CNAHIVVKWC 120 SGNTYKVSSL IEHHNHGLVL PDKVTKSKRR VSEKAKNKLS SSLAPECDEA LKPSVGMVFE 180 DIGSVEEFYK SYAHHCGFSV RVGQRKLLNN EVVQWKRFMC SREGFRSEKC MGVDDPSRKR 240 KVRKVTRCGC DARIIVKRCT DNKYKITSWI EHHNHGFVPP DKCHLIRSNR QLSDKVKPTV 300 STHCKASTCT SQANKPDHVS EGRSDNVGCT KRDLQKYHHD LCSKIKNEDA QIFVAQLCRK 360 QQEDSAFFFD CDVDDQGMLV HVFWADATSR KNYIYFSDML TFDCTNTLNQ HGMIFAPFTG 420 TNHHLQSVFF GAAFLADEKI ESYAWLFQTF LRVMGGVSPK TIVTRENDRM KAAISNVLPA 480 TTHRLCMLEM LERMPEKVEP SLRNNPLFQT RMNECVLGSE TVFEFESKWE SIISDFGLQG 540 NQWLAERYSA RERWILAYST DIHLSGILRS TAWSKSAKSF FNCFINQKLS LVEFWLRFEA 600 ALECQRQEES NADHTSAHTT PQLITPWGLE KHGSVVFTHE VFERFQEEIV AARDHCVVED 660 MAQTEGVKTV AIGGDDSDKV REVRWDAITM TANCSCKLFE SVGIPCRHIN LVLRSSKLNE 720 LPSSCVLKRW QKSAKFG

Sequence ? help Back to Top

Protein Sequence Length: 737 aa Download sequence

MWLRCAYLRQ ALQRSNRGAS EKEKVIPECD EALRPSLGMA FEGLSSAEEF YKSYARHCGF  60
KVRVGQHKLL NKEVVQFKRF MCSREGFRSD KGKDPSSERK KRNVKVTRCG CNAHIVVKWC  120
SGNTYKVSSL IEHHNHGLVL PDKVTKSKRR VSEKAKNKLS SSLAPECDEA LKPSVGMVFE  180
DIGSVEEFYK SYAHHCGFSV RVGQRKLLNN EVVQWKRFMC SREGFRSEKC MGVDDPSRKR  240
KVRKVTRCGC DARIIVKRCT DNKYKITSWI EHHNHGFVPP DKCHLIRSNR QLSDKVKPTV  300
STHCKASTCT SQANKPDHVS EGRSDNVGCT KRDLQKYHHD LCSKIKNEDA QIFVAQLCRK  360
QQEDSAFFFD CDVDDQGMLV HVFWADATSR KNYIYFSDML TFDCTNTLNQ HGMIFAPFTG  420
TNHHLQSVFF GAAFLADEKI ESYAWLFQTF LRVMGGVSPK TIVTRENDRM KAAISNVLPA  480
TTHRLCMLEM LERMPEKVEP SLRNNPLFQT RMNECVLGSE TVFEFESKWE SIISDFGLQG  540
NQWLAERYSA RERWILAYST DIHLSGILRS TAWSKSAKSF FNCFINQKLS LVEFWLRFEA  600
ALECQRQEES NADHTSAHTT PQLITPWGLE KHGSVVFTHE VFERFQEEIV AARDHCVVED  660
MAQTEGVKTV AIGGDDSDKV REVRWDAITM TANCSCKLFE SVGIPCRHIN LVLRSSKLNE  720
LPSSCVLKRW QKSAKFG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	238	265	RKRKVRKVTRCGCDARIIVKRCTDNKYK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-101	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC2AG050150.1